RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 EBF2Q9HAK2 575 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 MAGI2Q86UL8 1455 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ZC3H4Q9UPT8 1303 aaKnown RBP12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 A6NHS1 94 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ZSCAN22P10073 491 aaPredicted RBP12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 VCAM1P19320 739 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 TRPC1P48995 793 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 GSDMDP57764 484 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 PABPC4Q13310 644 aaKnown RBP eCLIP12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 SPAG5Q96R06 1193 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 PPIP5K1Q6PFW1 1433 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ARHGEF11O15085 1522 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 KIAA0586Q9BVV6 1533 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 TRPM1Q7Z4N2 1603 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ABL1P00519 1130 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 CDC25CP30307 473 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 SLC8A1P32418 973 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 ARHGAP25P42331 645 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 CCDC50Q8IVM0 306 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 SYCP3Q8IZU3 236 aa12.54□□□□□ -0.4
SEMA4B-204ENST00000558065 CDC42BPAQ5VT25 1732 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 GALNT17Q6IS24 598 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 UBE2OQ9C0C9 1292 aaKnown RBP12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 RABEP2Q9H5N1 569 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 E2F6O75461 281 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 FUKQ8N0W3 1084 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 TMEM221A6NGB7 291 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 MBD4O95243 580 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 DPY19L2Q6NUT2 758 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 SCLT1Q96NL6 688 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 URB2Q14146 1524 aaKnown RBP12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 UGGT2Q9NYU1 1516 aa12.53□□□□□ -0.4
SEMA4B-204ENST00000558065 BTG3Q14201 252 aaPredicted RBP12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 Q4G0T1 1027 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 HSP90AB2PQ58FF8 381 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 PAGR1Q9BTK6 254 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 NUP58Q9BVL2 599 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 FRMD4BQ9Y2L6 1034 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 ADGBQ8N7X0 1667 aa12.52□□□□□ -0.4
SEMA4B-204ENST00000558065 LIN7AO14910 233 aaPredicted RBP12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 PPP1R15BQ5SWA1 713 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 RASSF8Q8NHQ8 419 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 TSC22D3Q99576 134 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 TRPV5Q9NQA5 729 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 PHF24Q9UPV7 400 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 RGS12O14924 1447 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 KIAA0754O94854 1291 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 PSME1Q06323 249 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 CUL3Q13618 768 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 GNPTABQ3T906 1256 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 INTS3Q68E01 1043 aaKnown RBP12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 MIPOL1Q8TD10 442 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 IQSEC2Q5JU85 1478 aa12.52□□□□□ -0.41
SEMA4B-204ENST00000558065 MGRN1O60291 552 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 ZNF202O95125 648 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 KIF4AO95239 1232 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 FAM114A1Q8IWE2 563 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 CXorf38Q8TB03 319 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 CORO1BQ9BR76 489 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 F13A1P00488 732 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 B4GALNT4Q76KP1 1039 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 SMYD1Q8NB12 490 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 MPHOSPH8Q99549 860 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 PHF23Q9BUL5 403 aaPredicted RBP12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 ATP5JP18859 108 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 PABPC1LQ4VXU2 614 aaKnown RBP12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 SYNE3Q6ZMZ3 975 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 SMARCC1Q92922 1105 aaPredicted RBP12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 CCDC47Q96A33 483 aaKnown RBP12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 ZNF570Q96NI8 536 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 WDR24Q96S15 920 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 TRAIPQ9BWF2 469 aa12.51□□□□□ -0.41
SEMA4B-204ENST00000558065 ZSCAN12O43309 604 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 HOXA10P31260 410 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 CCDC170Q8IYT3 715 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 TMEM57Q8N5G2 664 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 KIFC2Q96AC6 838 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 GCC1Q96CN9 775 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 PCMTD2Q9NV79 361 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 CDK13Q14004 1512 aaKnown RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 MAP3K13O43283 966 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 ERLIN1O75477 346 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 XBP1P17861 261 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 DNM1Q05193 864 aaKnown RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 NUGGCQ68CJ6 796 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 GGT6Q6P531 493 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 SPATS2Q86XZ4 545 aaKnown RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 TNMDQ9H2S6 317 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 IMPACTQ9P2X3 320 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 IQSEC3Q9UPP2 1182 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 U2AF1L5P0DN76 240 aaPredicted RBP12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 NAT2P11245 290 aa12.5□□□□□ -0.41
SEMA4B-204ENST00000558065 ATP4AP20648 1035 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms