RNA–Protein interactions for RNA: ENST00000557829.1

CPNE6-204, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 2,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-204ENST00000557829 CACTINQ8WUQ7 758 aaKnown RBP15.42■□□□□ 0.06
CPNE6-204ENST00000557829 DDX11Q96FC9 970 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 SEC62Q99442 399 aaKnown RBP15.42■□□□□ 0.06
CPNE6-204ENST00000557829 FEZ1Q99689 392 aa15.42■□□□□ 0.06
CPNE6-204ENST00000557829 PTPDC1A2A3K4 754 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 RPS6KA4O75676 772 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 TNNT1P13805 278 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 EVCP57679 992 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 FOXO4P98177 505 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 FAM160A1Q05DH4 1040 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 SNW1Q13573 536 aaKnown RBP15.41■□□□□ 0.06
CPNE6-204ENST00000557829 ZNF34Q8IZ26 560 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 FAM89AQ96GI7 184 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 PAG1Q9NWQ8 432 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 KINO60870 393 aaKnown RBP15.41■□□□□ 0.06
CPNE6-204ENST00000557829 LRRC8AQ8IWT6 810 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 PROM2Q8N271 834 aa15.41■□□□□ 0.06
CPNE6-204ENST00000557829 BCORQ6W2J9 1755 aa15.4■□□□□ 0.06
CPNE6-204ENST00000557829 IL15P40933 162 aaPredicted RBP15.4■□□□□ 0.06
CPNE6-204ENST00000557829 LMBR1LQ6UX01 489 aa15.4■□□□□ 0.06
CPNE6-204ENST00000557829 DDX46Q7L014 1031 aaKnown RBP15.4■□□□□ 0.06
CPNE6-204ENST00000557829 CAMKK2Q96RR4 588 aa15.4■□□□□ 0.06
CPNE6-204ENST00000557829 NAT10Q9H0A0 1025 aaKnown RBP15.4■□□□□ 0.06
CPNE6-204ENST00000557829 A0A1W2PQ27 194 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 A0A1W2PQ64 194 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 A0A1W2PQD8 194 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 PCCAP05165 728 aaPredicted RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 BAG6P46379 1132 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 DHX8Q14562 1220 aaKnown RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 ZBTB38Q8NAP3 1195 aaPredicted RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 E7EWF7 191 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 TPD52L1Q16890 204 aaPredicted RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 LRRFIP1Q32MZ4 808 aaKnown RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 CCDC144BQ3MJ40 725 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 ATG9AQ7Z3C6 839 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 CCDC144CPQ8IYA2 1237 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 USP28Q96RU2 1077 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 RTEL1Q9NZ71 1219 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 SRP68Q9UHB9 627 aaKnown RBP15.39■□□□□ 0.05
CPNE6-204ENST00000557829 TAF1LQ8IZX4 1826 aa15.39■□□□□ 0.05
CPNE6-204ENST00000557829 BECN2A8MW95 431 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 RNF113AO15541 343 aaKnown RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 CIAO1O76071 339 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 ZSCAN20P17040 1043 aaPredicted RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 PDIA3P30101 505 aaKnown RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 APOBRQ0VD83 1088 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 SLC27A3Q5K4L6 730 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 C11orf57Q6ZUT1 292 aaPredicted RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 GOLPH3LQ9H4A5 285 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 RTCBQ9Y3I0 505 aaKnown RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 C4BP0C0L5 1744 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 HSPD1P10809 573 aaKnown RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 GSDMDP57764 484 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 TXNRD1Q16881 649 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 SUSD4Q5VX71 490 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 ADALQ6DHV7 355 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 DHX40Q8IX18 779 aaKnown RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 CEP57L1Q8IYX8 460 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 CCDC112Q8NEF3 446 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
CPNE6-204ENST00000557829 BPIFA3Q9BQP9 254 aa15.38■□□□□ 0.05
CPNE6-204ENST00000557829 DDX60Q8IY21 1712 aaKnown RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 FAM177BA6PVY3 158 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 GOLIM4O00461 696 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 NCBP1Q09161 790 aaKnown RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 ATP2B3Q16720 1220 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 ARHGEF1Q92888 912 aaKnown RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 AK7Q96M32 723 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 LRRC2Q9BYS8 371 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 CGNQ9P2M7 1197 aaKnown RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 IMPACTQ9P2X3 320 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 TRMT112Q9UI30 125 aaKnown RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 NIP7Q9Y221 180 aaKnown RBP eCLIP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 RGPD3A6NKT7 1758 aaPredicted RBP15.37■□□□□ 0.05
CPNE6-204ENST00000557829 RGPD4Q7Z3J3 1758 aa15.37■□□□□ 0.05
CPNE6-204ENST00000557829 KIF2AO00139 706 aaPredicted RBP15.36■□□□□ 0.05
CPNE6-204ENST00000557829 TAF3Q5VWG9 929 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 CEP135Q66GS9 1140 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 FSIP1Q8NA03 581 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 MRPS27Q92552 414 aaKnown RBP15.36■□□□□ 0.05
CPNE6-204ENST00000557829 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 CARMIL3Q8ND23 1372 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 CHGBP05060 677 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 NYAP1Q6ZVC0 841 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 FMR1NBQ8N0W7 255 aaPredicted RBP15.36■□□□□ 0.05
CPNE6-204ENST00000557829 NARFQ9UHQ1 456 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 CASZ1Q86V15 1759 aa15.36■□□□□ 0.05
CPNE6-204ENST00000557829 GOLGB1Q14789 3259 aaKnown RBP15.35■□□□□ 0.05
CPNE6-204ENST00000557829 EYA2O00167 538 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 CEBPZQ03701 1054 aaKnown RBP15.35■□□□□ 0.05
CPNE6-204ENST00000557829 NEUROD6Q96NK8 337 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 ARID3AQ99856 593 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 OSBPL5Q9H0X9 879 aaPredicted RBP15.35■□□□□ 0.05
CPNE6-204ENST00000557829 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 ZNF652Q9Y2D9 606 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 MAST3O60307 1309 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 CDHR2Q9BYE9 1310 aa15.35■□□□□ 0.05
CPNE6-204ENST00000557829 LAMB2P55268 1798 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms