RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
GPHN-216ENST00000557678 SMG8Q8ND04 991 aaKnown RBP5.68□□□□□ -1.5
GPHN-216ENST00000557678 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
GPHN-216ENST00000557678 YIPF2Q9BWQ6 316 aa5.68□□□□□ -1.5
GPHN-216ENST00000557678 EHD4Q9H223 541 aa5.68□□□□□ -1.5
GPHN-216ENST00000557678 EGFL7Q9UHF1 273 aa5.68□□□□□ -1.5
GPHN-216ENST00000557678 LEMD3Q9Y2U8 911 aa5.68□□□□□ -1.5
GPHN-216ENST00000557678 PRR19A6NJB7 356 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 KIAA1324LA8MWY0 1029 aaPredicted RBP5.67□□□□□ -1.5
GPHN-216ENST00000557678 EIF4EBP3O60516 100 aaPredicted RBP5.67□□□□□ -1.5
GPHN-216ENST00000557678 CYP11A1P05108 521 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 RAB6AP20340 208 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 MAOBP27338 520 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 GRIA4P48058 902 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 POU4F3Q15319 338 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 AKAP4Q5JQC9 854 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 USPL1Q5W0Q7 1092 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 CORO1BQ9BR76 489 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 SUGCTQ9HAC7 445 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 PIM2Q9P1W9 311 aa5.67□□□□□ -1.5
GPHN-216ENST00000557678 OAS3Q9Y6K5 1087 aaKnown RBP5.67□□□□□ -1.5
GPHN-216ENST00000557678 PAX4O43316 350 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 CPNE3O75131 537 aaKnown RBP5.66□□□□□ -1.5
GPHN-216ENST00000557678 GADD45BO75293 160 aaPredicted RBP5.66□□□□□ -1.5
GPHN-216ENST00000557678 WNT11O96014 354 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 SOX4Q06945 474 aaPredicted RBP5.66□□□□□ -1.5
GPHN-216ENST00000557678 PDE3BQ13370 1112 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 HP1BP3Q5SSJ5 553 aaPredicted RBP5.66□□□□□ -1.5
GPHN-216ENST00000557678 CDPF1Q6NVV7 123 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 DYMQ7RTS9 669 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 CCNJLQ8IV13 435 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 TBC1D32Q96NH3 1257 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 ZFYVE1Q9HBF4 777 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 ANGEL1Q9UNK9 670 aaKnown RBP5.66□□□□□ -1.5
GPHN-216ENST00000557678 AP4E1Q9UPM8 1137 aa5.66□□□□□ -1.5
GPHN-216ENST00000557678 TIAF1O95411 115 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 F13BP05160 661 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 HOXA10P31260 410 aaPredicted RBP5.65□□□□□ -1.5
GPHN-216ENST00000557678 ORC1Q13415 861 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 PDE3AQ14432 1141 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 ZNF423Q2M1K9 1284 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 C2CD4AQ8NCU7 369 aaPredicted RBP5.65□□□□□ -1.5
GPHN-216ENST00000557678 TCF12Q99081 682 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 NPHS2Q9NP85 383 aa5.65□□□□□ -1.5
GPHN-216ENST00000557678 ADH5P11766 374 aa5.64□□□□□ -1.51
GPHN-216ENST00000557678 SPINK2P20155 84 aa5.64□□□□□ -1.51
GPHN-216ENST00000557678 DTX1Q86Y01 620 aa5.64□□□□□ -1.51
GPHN-216ENST00000557678 NIF3L1Q9GZT8 377 aa5.64□□□□□ -1.51
GPHN-216ENST00000557678 COL17A1Q9UMD9 1497 aaPredicted RBP5.64□□□□□ -1.51
GPHN-216ENST00000557678 SUPT5HO00267 1087 aaKnown RBP5.63□□□□□ -1.51
GPHN-216ENST00000557678 CYP26A1O43174 497 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 ADAMTS4O75173 837 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 NFICP08651 508 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 TAL1P17542 331 aaPredicted RBP5.63□□□□□ -1.51
GPHN-216ENST00000557678 ZNF157P51786 506 aaPredicted RBP5.63□□□□□ -1.51
GPHN-216ENST00000557678 METTL22Q9BUU2 404 aaPredicted RBP5.63□□□□□ -1.51
GPHN-216ENST00000557678 LGR6Q9HBX8 967 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 LRRC4CQ9HCJ2 640 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 ACTL7BQ9Y614 415 aa5.63□□□□□ -1.51
GPHN-216ENST00000557678 ARID1BQ8NFD5 2236 aaPredicted RBP5.63□□□□□ -1.51
GPHN-216ENST00000557678 CTSBP07858 339 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 ASPAP45381 313 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 ARHGAP4P98171 946 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 MAP7Q14244 749 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 KIAA0319Q5VV43 1072 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 DUSP27Q5VZP5 1158 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 SHISA5Q8N114 240 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 CCER1Q8TC90 406 aaPredicted RBP5.62□□□□□ -1.51
GPHN-216ENST00000557678 ZC3H12CQ9C0D7 883 aaKnown RBP5.62□□□□□ -1.51
GPHN-216ENST00000557678 ZNF576Q9H609 170 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 DAGLAQ9Y4D2 1042 aa5.62□□□□□ -1.51
GPHN-216ENST00000557678 FAM170BA6NMN3 283 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 ECEL1O95672 775 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 FOSL1P15407 271 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 ADMP35318 185 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 PDE4CQ08493 712 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 ZAR1Q86SH2 424 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 RETREG2Q8NC44 543 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 CCDC74AQ96AQ1 378 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 CITED4Q96RK1 184 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 NRSN2Q9GZP1 204 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 BIN2Q9UBW5 565 aaPredicted RBP5.61□□□□□ -1.51
GPHN-216ENST00000557678 PRKAG2Q9UGJ0 569 aa5.61□□□□□ -1.51
GPHN-216ENST00000557678 EIF1AYO14602 144 aaKnown RBP5.6□□□□□ -1.51
GPHN-216ENST00000557678 B3GALT4O96024 378 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 TXKP42681 527 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 AP3B2Q13367 1082 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 CPSF6Q16630 551 aaKnown RBP eCLIP5.6□□□□□ -1.51
GPHN-216ENST00000557678 TP53INP2Q8IXH6 220 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 FAM129BQ96TA1 746 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 TRIM56Q9BRZ2 755 aaKnown RBP5.6□□□□□ -1.51
GPHN-216ENST00000557678 FAM105AQ9NUU6 356 aa5.6□□□□□ -1.51
GPHN-216ENST00000557678 GPN3Q9UHW5 284 aaPredicted RBP5.6□□□□□ -1.51
GPHN-216ENST00000557678 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
GPHN-216ENST00000557678 GPR182O15218 404 aa5.59□□□□□ -1.51
GPHN-216ENST00000557678 AOC2O75106 756 aa5.59□□□□□ -1.51
GPHN-216ENST00000557678 LIG1P18858 919 aa5.59□□□□□ -1.51
GPHN-216ENST00000557678 ITPKAP23677 461 aa5.59□□□□□ -1.51
GPHN-216ENST00000557678 HNRNPUQ00839 825 aaKnown RBP eCLIP5.59□□□□□ -1.51
GPHN-216ENST00000557678 ECM1Q16610 540 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms