RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 U2SURPO15042 1029 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 PTPN12Q05209 780 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 ARHGEF6Q15052 776 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 ARMC9Q7Z3E5 817 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 METTL3Q86U44 580 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 AGBL3Q8NEM8 1001 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 RTF1Q92541 710 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 TATDN2Q93075 761 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 COL25A1Q9BXS0 654 aaPredicted RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 PRO3102Q9H379 93 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 MYOZ2Q9NPC6 264 aa8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 RRP7AQ9Y3A4 280 aaKnown RBP8.96□□□□□ -0.98
SPTLC2-206ENST00000557566 RNF40O75150 1001 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 USP17L8P0C7I0 530 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 MYL6BP14649 208 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 SP3Q02447 781 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 PRAMEF18Q5VWM3 479 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 OTUD7BQ6GQQ9 843 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 IRX2Q9BZI1 471 aaPredicted RBP8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 POLLQ9UGP5 575 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 TIMELESSQ9UNS1 1208 aa8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 SCAF8Q9UPN6 1271 aaKnown RBP8.95□□□□□ -0.98
SPTLC2-206ENST00000557566 ZBTB48P10074 688 aaPredicted RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 HCLS1P14317 486 aaPredicted RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 CLCN1P35523 988 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 CRHR2Q13324 411 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 RSBN1LQ6PCB5 846 aaPredicted RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 MCM10Q7L590 875 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 PXYLP1Q8TE99 480 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 PHOX2BQ99453 314 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 HTATIP2Q9BUP3 242 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 ZC3H12CQ9C0D7 883 aaKnown RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 NR2E3Q9Y5X4 410 aa8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 COL3A1P02461 1466 aaPredicted RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 ZNF646O15015 1829 aaPredicted RBP8.94□□□□□ -0.98
SPTLC2-206ENST00000557566 IGF2BP3O00425 579 aaKnown RBP eCLIP8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 SOX1O00570 391 aaPredicted RBP8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 MYCP01106 439 aaPredicted RBP8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 PRKG1Q13976 671 aa8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 LDLRAD1Q5T700 205 aa8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 LRCH3Q96II8 777 aa8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 PTCH2Q9Y6C5 1203 aa8.93□□□□□ -0.98
SPTLC2-206ENST00000557566 PRKAR2BP31323 418 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 GPSM2P81274 684 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 TAF7Q15545 349 aaPredicted RBP8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 IL27Q8NEV9 243 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 TBC1D16Q8TBP0 767 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 WNT2BQ93097 391 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 PHACTR3Q96KR7 559 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 REPIN1Q9BWE0 567 aaKnown RBP8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 FAM117AQ9C073 453 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 GPCPD1Q9NPB8 672 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 TRMT112Q9UI30 125 aaKnown RBP8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 ANGEL1Q9UNK9 670 aaKnown RBP8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 STXBP5LQ9Y2K9 1186 aa8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 SPTBN5Q9NRC6 3674 aaKnown RBP8.92□□□□□ -0.98
SPTLC2-206ENST00000557566 ERBB4Q15303 1308 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 SH3TC1Q8TE82 1336 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 WTIPA6NIX2 430 aaPredicted RBP8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 BHMG1C9JSJ3 638 aaPredicted RBP8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 C3orf80F5H4A9 247 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 PTPN5P54829 565 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 NBPF9Q3BBW0 867 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 HSP90AB3PQ58FF7 597 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 LAPTM4BQ86VI4 370 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 DEFB123Q8N688 67 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 ANKK1Q8NFD2 765 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 CELF1Q92879 486 aaKnown RBP8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 WNK4Q96J92 1243 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 GMLQ99445 158 aa8.91□□□□□ -0.98
SPTLC2-206ENST00000557566 ZBTB7BO15156 539 aaPredicted RBP8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 HTATSF1O43719 755 aaKnown RBP8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 RGS20O76081 388 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 CAP1Q01518 475 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 DCTN1Q14203 1278 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 NLRP10Q86W26 655 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 APOBEC3FQ8IUX4 373 aaKnown RBP8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 OGFOD1Q8N543 542 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 NKX2-3Q8TAU0 364 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 ZFRQ96KR1 1074 aaKnown RBP8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 RSPH6AQ9H0K4 717 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 MIS18AQ9NYP9 233 aa8.9□□□□□ -0.98
SPTLC2-206ENST00000557566 COL1A1P02452 1464 aaPredicted RBP8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 USP17L3A6NCW0 530 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 USP17L4A6NCW7 530 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 UNCXA6NJT0 531 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 WNT10BO00744 389 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 UFL1O94874 794 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 MDM2Q00987 491 aaPredicted RBP8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 USP17L1Q7RTZ2 530 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 SH3TC2Q8TF17 1288 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 NLRP7Q8WX94 980 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 SHISA4Q96DD7 197 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 GOPCQ9HD26 462 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 PRDM6Q9NQX0 595 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 PODXL2Q9NZ53 605 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms