RNA–Protein interactions for RNA: ENST00000557428.1

PCNX1-215, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 541 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-215ENST00000557428 GNAI1P63096 354 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 LACTBP83111 547 aaPredicted RBP10.31□□□□□ -0.76
PCNX1-215ENST00000557428 KSR2Q6VAB6 950 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.31□□□□□ -0.76
PCNX1-215ENST00000557428 C8orf58Q8NAV2 365 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 RAET1EQ8TD07 263 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 HTATIP2Q9BUP3 242 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 STK31Q9BXU1 1019 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 TMEM39BQ9GZU3 492 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 IFT57Q9NWB7 429 aa10.31□□□□□ -0.76
PCNX1-215ENST00000557428 COL6A3P12111 3177 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 FMNL1O95466 1100 aaPredicted RBP10.3□□□□□ -0.76
PCNX1-215ENST00000557428 CETPP11597 493 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 TNNI2P48788 182 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 MAP3K9P80192 1104 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 RALBP1Q15311 655 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 SPDYE2Q495Y8 402 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 CPA4Q9UI42 421 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 TTF2Q9UNY4 1162 aaKnown RBP10.3□□□□□ -0.76
PCNX1-215ENST00000557428 NR2E3Q9Y5X4 410 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 AK9Q5TCS8 1911 aa10.3□□□□□ -0.76
PCNX1-215ENST00000557428 RANBP2P49792 3224 aaKnown RBP10.29□□□□□ -0.76
PCNX1-215ENST00000557428 BTBD19C9JJ37 291 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 TLR2O60603 784 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 CCL5P13501 91 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 DSG3P32926 999 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 PSMC4P43686 418 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 CALD1Q05682 793 aaKnown RBP10.29□□□□□ -0.76
PCNX1-215ENST00000557428 MFSD14BQ5SR56 506 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.29□□□□□ -0.76
PCNX1-215ENST00000557428 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 WRNIP1Q96S55 665 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 RNF208Q9H0X6 261 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 ADAMTS8Q9UP79 889 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 MGAMO43451 1857 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 MYPNQ86TC9 1320 aa10.29□□□□□ -0.76
PCNX1-215ENST00000557428 MYBBP1AQ9BQG0 1328 aaKnown RBP10.29□□□□□ -0.76
PCNX1-215ENST00000557428 SPDYE5A6NIY4 337 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 H7C1W4 665 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 FARP2O94887 1054 aaPredicted RBP10.28□□□□□ -0.76
PCNX1-215ENST00000557428 ZNF853P0CG23 659 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 IL1R1P14778 569 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 GRK4P32298 578 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 CACNB3P54284 484 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 PRMT2P55345 433 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 FKBP1AP62942 108 aaKnown RBP10.28□□□□□ -0.76
PCNX1-215ENST00000557428 SNAPC2Q13487 334 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 DZIP1LQ8IYY4 767 aaKnown RBP10.28□□□□□ -0.76
PCNX1-215ENST00000557428 TSPYL6Q8N831 410 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 ZKSCAN4Q969J2 545 aaPredicted RBP10.28□□□□□ -0.76
PCNX1-215ENST00000557428 LRCH3Q96II8 777 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 MYH16Q9H6N6 1097 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 RIPOR2Q9Y4F9 1068 aa10.28□□□□□ -0.76
PCNX1-215ENST00000557428 SOX1O00570 391 aaPredicted RBP10.27□□□□□ -0.77
PCNX1-215ENST00000557428 ZBTB7BO15156 539 aaPredicted RBP10.27□□□□□ -0.77
PCNX1-215ENST00000557428 EVI5O60447 810 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 GNRH1P01148 92 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 OSBPP22059 807 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 HOXD10P28358 340 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 CRKP46108 304 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 UBXN2AP68543 259 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 CHAF1AQ13111 956 aaPredicted RBP10.27□□□□□ -0.77
PCNX1-215ENST00000557428 IFIT5Q13325 482 aaKnown RBP10.27□□□□□ -0.77
PCNX1-215ENST00000557428 GCKRQ14397 625 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 G2E3Q7L622 706 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 TRIM47Q96LD4 638 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 TEPSINQ96N21 525 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 CHMP4AQ9BY43 222 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 CNNM1Q9NRU3 951 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 SRRDQ9UH36 339 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 SNCAIPQ9Y6H5 919 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 IRS2Q9Y4H2 1338 aa10.27□□□□□ -0.77
PCNX1-215ENST00000557428 APAF1O14727 1248 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 IRF6O14896 467 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 CTGFP29279 349 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 GYG1P46976 350 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 GJA8P48165 433 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 FKBP5Q13451 457 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 C15orf52Q6ZUT6 534 aaKnown RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 ERO1BQ86YB8 467 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 TSR2Q969E8 191 aaKnown RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 ZNF594Q96JF6 807 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 PLA2G12BQ9BX93 195 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 SERPINA10Q9UK55 444 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 FBXO3Q9UK99 471 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 TAOK2Q9UL54 1235 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 IQSEC3Q9UPP2 1182 aaPredicted RBP10.26□□□□□ -0.77
PCNX1-215ENST00000557428 A0A0C4DFX4 3053 aa10.26□□□□□ -0.77
PCNX1-215ENST00000557428 ALPK3Q96L96 1907 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 PDHXO00330 501 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 FRAT2O75474 233 aaPredicted RBP10.25□□□□□ -0.77
PCNX1-215ENST00000557428 CSF1RP07333 972 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 GJB1P08034 283 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 CACNB1Q02641 598 aaPredicted RBP10.25□□□□□ -0.77
PCNX1-215ENST00000557428 PRKCZQ05513 592 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 PPIL2Q13356 520 aa10.25□□□□□ -0.77
PCNX1-215ENST00000557428 VPS37DQ86XT2 251 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms