RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 DNAJC25Q9H1X3 360 aa8.31□□□□□ -1.08
VRK1-207ENST00000557352 EHD4Q9H223 541 aa8.31□□□□□ -1.08
VRK1-207ENST00000557352 PRR19A6NJB7 356 aa8.3□□□□□ -1.08
VRK1-207ENST00000557352 SGO2Q562F6 1265 aa8.3□□□□□ -1.08
VRK1-207ENST00000557352 KRTAP4-12Q9BQ66 201 aa8.3□□□□□ -1.08
VRK1-207ENST00000557352 RBCK1Q9BYM8 510 aa8.3□□□□□ -1.08
VRK1-207ENST00000557352 DRD2P14416 443 aa8.29□□□□□ -1.08
VRK1-207ENST00000557352 ITPKAP23677 461 aa8.29□□□□□ -1.08
VRK1-207ENST00000557352 MAP4P27816 1152 aaKnown RBP8.29□□□□□ -1.08
VRK1-207ENST00000557352 ALKBH8Q96BT7 664 aaKnown RBP8.29□□□□□ -1.08
VRK1-207ENST00000557352 DMRTB1Q96MA1 342 aa8.29□□□□□ -1.08
VRK1-207ENST00000557352 ZNF576Q9H609 170 aa8.29□□□□□ -1.08
VRK1-207ENST00000557352 GNEQ9Y223 722 aaKnown RBP8.29□□□□□ -1.08
VRK1-207ENST00000557352 B3GALT4O96024 378 aa8.28□□□□□ -1.08
VRK1-207ENST00000557352 CYP11A1P05108 521 aa8.28□□□□□ -1.08
VRK1-207ENST00000557352 CTSBP07858 339 aa8.28□□□□□ -1.08
VRK1-207ENST00000557352 MAOBP27338 520 aa8.28□□□□□ -1.08
VRK1-207ENST00000557352 CSRNP1Q96S65 589 aa8.28□□□□□ -1.08
VRK1-207ENST00000557352 ADAMTS4O75173 837 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 BRD1O95696 1058 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 SPINK2P20155 84 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 RXRBP28702 533 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 SOX4Q06945 474 aaPredicted RBP8.27□□□□□ -1.09
VRK1-207ENST00000557352 POU4F3Q15319 338 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 MCTP1Q6DN14 999 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 SHKBP1Q8TBC3 707 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 TRIM56Q9BRZ2 755 aaKnown RBP8.27□□□□□ -1.09
VRK1-207ENST00000557352 ABCB6Q9NP58 842 aa8.27□□□□□ -1.09
VRK1-207ENST00000557352 GADD45BO75293 160 aaPredicted RBP8.26□□□□□ -1.09
VRK1-207ENST00000557352 PTPN12Q05209 780 aaKnown RBP8.26□□□□□ -1.09
VRK1-207ENST00000557352 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
VRK1-207ENST00000557352 PRPF40BQ6NWY9 871 aaKnown RBP8.26□□□□□ -1.09
VRK1-207ENST00000557352 TMC7Q7Z402 723 aa8.26□□□□□ -1.09
VRK1-207ENST00000557352 C2CD4AQ8NCU7 369 aaPredicted RBP8.26□□□□□ -1.09
VRK1-207ENST00000557352 BIN2Q9UBW5 565 aaPredicted RBP8.26□□□□□ -1.09
VRK1-207ENST00000557352 TMEM238LA0A1B0GVL6 79 aa8.25□□□□□ -1.09
VRK1-207ENST00000557352 ECEL1O95672 775 aa8.25□□□□□ -1.09
VRK1-207ENST00000557352 USP11P51784 963 aa8.25□□□□□ -1.09
VRK1-207ENST00000557352 INTS5Q6P9B9 1019 aaKnown RBP8.25□□□□□ -1.09
VRK1-207ENST00000557352 GLIS3Q8NEA6 775 aa8.25□□□□□ -1.09
VRK1-207ENST00000557352 DDX54Q8TDD1 881 aaKnown RBP8.25□□□□□ -1.09
VRK1-207ENST00000557352 EPS8L3Q8TE67 593 aaKnown RBP8.25□□□□□ -1.09
VRK1-207ENST00000557352 MFSD14AQ96MC6 490 aa8.25□□□□□ -1.09
VRK1-207ENST00000557352 OAS3Q9Y6K5 1087 aaKnown RBP8.25□□□□□ -1.09
VRK1-207ENST00000557352 COL17A1Q9UMD9 1497 aaPredicted RBP8.25□□□□□ -1.09
VRK1-207ENST00000557352 FAM95CA0A1B0GW59 222 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 WDR64B1ANS9 1081 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 ADH5P11766 374 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 GRIK1P39086 918 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 GRM2Q14416 872 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 DTX1Q86Y01 620 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 FBLIM1Q8WUP2 373 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 CORO1BQ9BR76 489 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 ZFYVE1Q9HBF4 777 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 DCTN4Q9UJW0 460 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 TRAK1Q9UPV9 953 aa8.24□□□□□ -1.09
VRK1-207ENST00000557352 GP2P55259 537 aaKnown RBP8.23□□□□□ -1.09
VRK1-207ENST00000557352 NFKBIBQ15653 356 aa8.23□□□□□ -1.09
VRK1-207ENST00000557352 RPS26P11Q5JNZ5 115 aaPredicted RBP8.23□□□□□ -1.09
VRK1-207ENST00000557352 HP1BP3Q5SSJ5 553 aaPredicted RBP8.23□□□□□ -1.09
VRK1-207ENST00000557352 KRTAP1-3Q8IUG1 177 aa8.23□□□□□ -1.09
VRK1-207ENST00000557352 F13BP05160 661 aa8.22□□□□□ -1.09
VRK1-207ENST00000557352 PAOXQ6QHF9 649 aa8.22□□□□□ -1.09
VRK1-207ENST00000557352 FBXL6Q8N531 539 aa8.22□□□□□ -1.09
VRK1-207ENST00000557352 EZH1Q92800 747 aaPredicted RBP8.22□□□□□ -1.09
VRK1-207ENST00000557352 RAD18Q9NS91 495 aa8.22□□□□□ -1.09
VRK1-207ENST00000557352 ACTL7BQ9Y614 415 aa8.22□□□□□ -1.09
VRK1-207ENST00000557352 FAAP100Q0VG06 881 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 DSC3Q14574 896 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 AKAP4Q5JQC9 854 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 PI16Q6UXB8 463 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 SHISA5Q8N114 240 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 YIPF2Q9BWQ6 316 aa8.21□□□□□ -1.1
VRK1-207ENST00000557352 MAPK1P28482 360 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 HOXA10P31260 410 aaPredicted RBP8.2□□□□□ -1.1
VRK1-207ENST00000557352 ZNF157P51786 506 aaPredicted RBP8.2□□□□□ -1.1
VRK1-207ENST00000557352 AP3B2Q13367 1082 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 DYMQ7RTS9 669 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 KRTAP19-1Q8IUB9 90 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 GIMAP7Q8NHV1 300 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 ATG3Q9NT62 314 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 NLRP2Q9NX02 1062 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 PIM2Q9P1W9 311 aa8.2□□□□□ -1.1
VRK1-207ENST00000557352 AOC2O75106 756 aa8.19□□□□□ -1.1
VRK1-207ENST00000557352 PDE3AQ14432 1141 aa8.19□□□□□ -1.1
VRK1-207ENST00000557352 LCE3BQ5TA77 95 aa8.19□□□□□ -1.1
VRK1-207ENST00000557352 FAM105AQ9NUU6 356 aa8.19□□□□□ -1.1
VRK1-207ENST00000557352 PRKAG2Q9UGJ0 569 aa8.19□□□□□ -1.1
VRK1-207ENST00000557352 TREHO43280 583 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 NFICP08651 508 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 ADMP35318 185 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 IRAK1P51617 712 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 FCGRTP55899 365 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 PLCB3Q01970 1234 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 DTHD1Q6ZMT9 781 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 OSBPL1AQ9BXW6 950 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 BCO2Q9BYV7 579 aa8.18□□□□□ -1.1
VRK1-207ENST00000557352 GSX1Q9H4S2 264 aaPredicted RBP8.18□□□□□ -1.1
VRK1-207ENST00000557352 AP4E1Q9UPM8 1137 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms