RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 POLR3DP05423 398 aaPredicted RBP6.61□□□□□ -1.35
CHD8-212ENST00000557329 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 VN1R5Q7Z5H4 357 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 WFDC12Q8WWY7 111 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 RNF208Q9H0X6 261 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 CHD1O14646 1710 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 TMEM238LA0A1B0GVL6 79 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 MEGF11A6BM72 1044 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 BTBD11A6QL63 1104 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 F8W735 103 aaPredicted RBP6.6□□□□□ -1.35
CHD8-212ENST00000557329 ESRRAP11474 423 aaPredicted RBP6.6□□□□□ -1.35
CHD8-212ENST00000557329 MAPK8P45983 427 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 PPP2R3AQ06190 1150 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 PCDH1Q08174 1060 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 CCDC27Q2M243 656 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 ANKRD34AQ69YU3 496 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.6□□□□□ -1.35
CHD8-212ENST00000557329 LATS2Q9NRM7 1088 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 WIZO95785 1651 aa6.6□□□□□ -1.35
CHD8-212ENST00000557329 SOX1O00570 391 aaPredicted RBP6.59□□□□□ -1.35
CHD8-212ENST00000557329 ACPPP15309 386 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 GSTT1P30711 240 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 AP3B2Q13367 1082 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 USPL1Q5W0Q7 1092 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 SHISA2Q6UWI4 295 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 Q6ZS46 218 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 KRTAP19-1Q8IUB9 90 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 ANKRD24Q8TF21 1146 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 SLC7A3Q8WY07 619 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 KRTAP9-9Q9BYP9 154 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 KRTAP9-4Q9BYQ2 154 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 PPM1HQ9ULR3 514 aa6.59□□□□□ -1.35
CHD8-212ENST00000557329 RSF1Q96T23 1441 aaPredicted RBP6.59□□□□□ -1.36
CHD8-212ENST00000557329 B3GALT4O96024 378 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 EAPPQ56P03 285 aaPredicted RBP6.58□□□□□ -1.36
CHD8-212ENST00000557329 DTHD1Q6ZMT9 781 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 ACAD11Q709F0 780 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 DZIP1LQ8IYY4 767 aaKnown RBP6.58□□□□□ -1.36
CHD8-212ENST00000557329 GALNT11Q8NCW6 608 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 KLHDC7BQ96G42 594 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 SSBP4Q9BWG4 385 aaPredicted RBP6.58□□□□□ -1.36
CHD8-212ENST00000557329 CEP44Q9C0F1 390 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 ZNF576Q9H609 170 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 GOLGA2P5Q9HBQ8 144 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 CYP4F12Q9HCS2 524 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 HIF3AQ9Y2N7 669 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 SAMM50Q9Y512 469 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.58□□□□□ -1.36
CHD8-212ENST00000557329 CFTRP13569 1480 aa6.58□□□□□ -1.36
CHD8-212ENST00000557329 SYNGAP1Q96PV0 1343 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 PRPF40AO75400 957 aaKnown RBP6.57□□□□□ -1.36
CHD8-212ENST00000557329 TRPA1O75762 1119 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 NOS3P29474 1203 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 CDC25BP30305 580 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 GRIA4P48058 902 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 IREB2P48200 963 aaKnown RBP6.57□□□□□ -1.36
CHD8-212ENST00000557329 GRM2Q14416 872 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 EXOSC6Q5RKV6 272 aaKnown RBP6.57□□□□□ -1.36
CHD8-212ENST00000557329 TXNDC11Q6PKC3 985 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 HHIPQ96QV1 700 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 BCO2Q9BYV7 579 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 ABCB6Q9NP58 842 aa6.57□□□□□ -1.36
CHD8-212ENST00000557329 EIF4G3O43432 1585 aaKnown RBP6.57□□□□□ -1.36
CHD8-212ENST00000557329 ANKRD33BA6NCL7 494 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 GSC2O15499 205 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 SART1O43290 800 aaKnown RBP6.56□□□□□ -1.36
CHD8-212ENST00000557329 LDHBP07195 334 aaKnown RBP6.56□□□□□ -1.36
CHD8-212ENST00000557329 GSTM4Q03013 218 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.56□□□□□ -1.36
CHD8-212ENST00000557329 SCARA3Q6AZY7 606 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 EPS8L3Q8TE67 593 aaKnown RBP6.56□□□□□ -1.36
CHD8-212ENST00000557329 TP53INP1Q96A56 240 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 CORO1BQ9BR76 489 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 RUSC1Q9BVN2 902 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 CARD10Q9BWT7 1032 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 EMILIN2Q9BXX0 1053 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 GZF1Q9H116 711 aaPredicted RBP6.56□□□□□ -1.36
CHD8-212ENST00000557329 SUGCTQ9HAC7 445 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 FAM8A1Q9UBU6 413 aa6.56□□□□□ -1.36
CHD8-212ENST00000557329 TM4SF5O14894 197 aa6.55□□□□□ -1.36
CHD8-212ENST00000557329 NUTM2GQ5VZR2 741 aa6.55□□□□□ -1.36
CHD8-212ENST00000557329 FDX2Q6P4F2 183 aa6.55□□□□□ -1.36
CHD8-212ENST00000557329 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
CHD8-212ENST00000557329 TMEM39AQ9NV64 488 aa6.55□□□□□ -1.36
CHD8-212ENST00000557329 TDRD9Q8NDG6 1382 aaKnown RBP6.55□□□□□ -1.36
CHD8-212ENST00000557329 DHX15O43143 795 aaKnown RBP6.54□□□□□ -1.36
CHD8-212ENST00000557329 GLB1P16278 677 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 GNA15P30679 374 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 NLRP12P59046 1061 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 POU4F3Q15319 338 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 SPRED3Q2MJR0 410 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 SMG8Q8ND04 991 aaKnown RBP6.54□□□□□ -1.36
CHD8-212ENST00000557329 GLIS3Q8NEA6 775 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 FOXD4L4Q8WXT5 416 aaPredicted RBP6.54□□□□□ -1.36
CHD8-212ENST00000557329 RNF112Q9ULX5 631 aa6.54□□□□□ -1.36
CHD8-212ENST00000557329 METTL12A8MUP2 240 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 P4HBP07237 508 aaKnown RBP6.53□□□□□ -1.36
CHD8-212ENST00000557329 FCGRTP55899 365 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 ZNF423Q2M1K9 1284 aa6.53□□□□□ -1.36
CHD8-212ENST00000557329 DIEXFQ68CQ4 756 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms