RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 KIF22Q14807 665 aa12.29□□□□□ -0.44
RIPK3-205ENST00000557253 ZNF594Q96JF6 807 aaPredicted RBP12.29□□□□□ -0.44
RIPK3-205ENST00000557253 CHMP4AQ9BY43 222 aa12.29□□□□□ -0.44
RIPK3-205ENST00000557253 CSADQ9Y600 493 aa12.29□□□□□ -0.44
RIPK3-205ENST00000557253 DLL1O00548 723 aa12.28□□□□□ -0.44
RIPK3-205ENST00000557253 ANP32CO43423 234 aa12.28□□□□□ -0.44
RIPK3-205ENST00000557253 LACTBP83111 547 aaPredicted RBP12.28□□□□□ -0.44
RIPK3-205ENST00000557253 IFIT5Q13325 482 aaKnown RBP12.28□□□□□ -0.44
RIPK3-205ENST00000557253 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
RIPK3-205ENST00000557253 DZIP1LQ8IYY4 767 aaKnown RBP12.28□□□□□ -0.44
RIPK3-205ENST00000557253 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.28□□□□□ -0.44
RIPK3-205ENST00000557253 SHISA4Q96DD7 197 aa12.28□□□□□ -0.44
RIPK3-205ENST00000557253 MYH16Q9H6N6 1097 aa12.28□□□□□ -0.44
RIPK3-205ENST00000557253 BTBD19C9JJ37 291 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 TLR2O60603 784 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 CTGFP29279 349 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 CACNB3P54284 484 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 FOXO4P98177 505 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 TWISTNBQ3B726 338 aaPredicted RBP12.27□□□□□ -0.45
RIPK3-205ENST00000557253 SLC17A8Q8NDX2 589 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 SERPINA10Q9UK55 444 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 ARAP2Q8WZ64 1704 aa12.27□□□□□ -0.45
RIPK3-205ENST00000557253 WDHD1O75717 1129 aaPredicted RBP12.26□□□□□ -0.45
RIPK3-205ENST00000557253 CETPP11597 493 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 CRKP46108 304 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 GYG1P46976 350 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 TNNI2P48788 182 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 FLIIQ13045 1269 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 FKBP5Q13451 457 aaPredicted RBP12.26□□□□□ -0.45
RIPK3-205ENST00000557253 GRIK5Q16478 980 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 ZKSCAN4Q969J2 545 aaPredicted RBP12.26□□□□□ -0.45
RIPK3-205ENST00000557253 CNNM1Q9NRU3 951 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 SNCAIPQ9Y6H5 919 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 FAM205AQ6ZU69 1335 aa12.26□□□□□ -0.45
RIPK3-205ENST00000557253 SPDYE5A6NIY4 337 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 IRF6O14896 467 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 TAF7LQ5H9L4 462 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 EPHA10Q5JZY3 1008 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 LMBR1LQ6UX01 489 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 LINS1Q8NG48 757 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 TDRD7Q8NHU6 1098 aaKnown RBP12.25□□□□□ -0.45
RIPK3-205ENST00000557253 WRNIP1Q96S55 665 aa12.25□□□□□ -0.45
RIPK3-205ENST00000557253 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
RIPK3-205ENST00000557253 HIBADHP31937 336 aaKnown RBP12.24□□□□□ -0.45
RIPK3-205ENST00000557253 PSMC4P43686 418 aa12.24□□□□□ -0.45
RIPK3-205ENST00000557253 CCDC57Q2TAC2 916 aa12.24□□□□□ -0.45
RIPK3-205ENST00000557253 ERO1BQ86YB8 467 aa12.24□□□□□ -0.45
RIPK3-205ENST00000557253 FAM84BQ96KN1 310 aaPredicted RBP12.24□□□□□ -0.45
RIPK3-205ENST00000557253 TRIM47Q96LD4 638 aa12.24□□□□□ -0.45
RIPK3-205ENST00000557253 F6X3S4 739 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
RIPK3-205ENST00000557253 GNRH1P01148 92 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 CCL5P13501 91 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 OSBPP22059 807 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 GRK4P32298 578 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 PRMT2P55345 433 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 CHAF1AQ13111 956 aaPredicted RBP12.23□□□□□ -0.45
RIPK3-205ENST00000557253 SNAPC2Q13487 334 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 C17orf99Q6UX52 265 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.23□□□□□ -0.45
RIPK3-205ENST00000557253 RAET1EQ8TD07 263 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 BIN2Q9UBW5 565 aaPredicted RBP12.23□□□□□ -0.45
RIPK3-205ENST00000557253 SRRDQ9UH36 339 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 RIPOR2Q9Y4F9 1068 aa12.23□□□□□ -0.45
RIPK3-205ENST00000557253 MYPNQ86TC9 1320 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 GJA8P48165 433 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 PPIL2Q13356 520 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 MIGA2Q7L4E1 593 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 NKX2-3Q8TAU0 364 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 HTATIP2Q9BUP3 242 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
RIPK3-205ENST00000557253 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 PRO3102Q9H379 93 aa12.22□□□□□ -0.45
RIPK3-205ENST00000557253 ZCCHC17Q9NP64 241 aaKnown RBP12.22□□□□□ -0.45
RIPK3-205ENST00000557253 PDHXO00330 501 aa12.21□□□□□ -0.45
RIPK3-205ENST00000557253 SOX1O00570 391 aaPredicted RBP12.21□□□□□ -0.45
RIPK3-205ENST00000557253 HOXD10P28358 340 aa12.21□□□□□ -0.45
RIPK3-205ENST00000557253 UBE4AQ14139 1066 aa12.21□□□□□ -0.45
RIPK3-205ENST00000557253 UBE2Q1Q7Z7E8 422 aa12.21□□□□□ -0.45
RIPK3-205ENST00000557253 RANBP2P49792 3224 aaKnown RBP12.21□□□□□ -0.46
RIPK3-205ENST00000557253 TRIOBPQ9H2D6 2365 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 CCER2I3L3R5 266 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 ZBTB7BO15156 539 aaPredicted RBP12.2□□□□□ -0.46
RIPK3-205ENST00000557253 FRAT2O75474 233 aaPredicted RBP12.2□□□□□ -0.46
RIPK3-205ENST00000557253 GJB1P08034 283 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 INPP5BP32019 993 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 PRKCZQ05513 592 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 BEND3Q5T5X7 828 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 VPS37DQ86XT2 251 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 TEKT1Q969V4 418 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 LRCH3Q96II8 777 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 NR2E3Q9Y5X4 410 aa12.2□□□□□ -0.46
RIPK3-205ENST00000557253 ADGRA2Q96PE1 1338 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 FARP2O94887 1054 aaPredicted RBP12.19□□□□□ -0.46
RIPK3-205ENST00000557253 UBXN2AP68543 259 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 PPATQ06203 517 aa12.19□□□□□ -0.46
RIPK3-205ENST00000557253 ANKRD23Q86SG2 305 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms