RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 DLGAP5Q15398 846 aa16.24■□□□□ 0.19
ABCD4-226ENST00000556971 KHSRPQ92945 711 aaKnown RBP eCLIP16.24■□□□□ 0.19
ABCD4-226ENST00000556971 BAHCC1Q9P281 2608 aa16.24■□□□□ 0.19
ABCD4-226ENST00000556971 DOCK3Q8IZD9 2030 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 RPS8P62241 208 aaKnown RBP16.23■□□□□ 0.19
ABCD4-226ENST00000556971 IRF5Q13568 498 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 RASA3Q14644 834 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 STRIP1Q5VSL9 837 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 MTMR14Q8NCE2 650 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 GAS2L1Q99501 681 aaPredicted RBP16.23■□□□□ 0.19
ABCD4-226ENST00000556971 SPTBN4Q9H254 2564 aa16.23■□□□□ 0.19
ABCD4-226ENST00000556971 AOX1Q06278 1338 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 PDHXO00330 501 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 IRF6O14896 467 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 MAP3K9P80192 1104 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 AKNAD1Q5T1N1 836 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 CDAN1Q8IWY9 1227 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 OGDHLQ9ULD0 1010 aa16.22■□□□□ 0.19
ABCD4-226ENST00000556971 BCRP11274 1271 aa16.21■□□□□ 0.19
ABCD4-226ENST00000556971 COL6A1P12109 1028 aa16.21■□□□□ 0.19
ABCD4-226ENST00000556971 MMP14P50281 582 aa16.21■□□□□ 0.19
ABCD4-226ENST00000556971 SF3B3Q15393 1217 aaKnown RBP16.21■□□□□ 0.19
ABCD4-226ENST00000556971 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.21■□□□□ 0.192e-6■■■□□ 15.6
ABCD4-226ENST00000556971 KCNQ1P51787 676 aa16.2■□□□□ 0.18
ABCD4-226ENST00000556971 TFF2Q03403 129 aa16.2■□□□□ 0.18
ABCD4-226ENST00000556971 MCM10Q7L590 875 aa16.2■□□□□ 0.18
ABCD4-226ENST00000556971 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
ABCD4-226ENST00000556971 DNAH12Q6ZR08 3092 aa16.2■□□□□ 0.18
ABCD4-226ENST00000556971 TNPO2O14787 897 aaKnown RBP16.19■□□□□ 0.18
ABCD4-226ENST00000556971 MYO1BO43795 1136 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 U2AF1L5P0DN76 240 aaPredicted RBP16.19■□□□□ 0.18
ABCD4-226ENST00000556971 DNAJB2P25686 324 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 U2AF1Q01081 240 aaKnown RBP eCLIP16.19■□□□□ 0.18
ABCD4-226ENST00000556971 TRIM32Q13049 653 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 ANKRD23Q86SG2 305 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 FBXL18Q96ME1 805 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 THUMPD2Q9BTF0 503 aaKnown RBP16.19■□□□□ 0.18
ABCD4-226ENST00000556971 ZNF576Q9H609 170 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 WDFY4Q6ZS81 3184 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 XDHP47989 1333 aa16.19■□□□□ 0.18
ABCD4-226ENST00000556971 XIRP2A4UGR9 3374 aa16.18■□□□□ 0.18
ABCD4-226ENST00000556971 ERO1BQ86YB8 467 aa16.18■□□□□ 0.18
ABCD4-226ENST00000556971 HMX1Q9NP08 348 aaPredicted RBP16.18■□□□□ 0.18
ABCD4-226ENST00000556971 CXXC1Q9P0U4 656 aaPredicted RBP16.18■□□□□ 0.18
ABCD4-226ENST00000556971 PRKAG2Q9UGJ0 569 aa16.18■□□□□ 0.18
ABCD4-226ENST00000556971 ST18O60284 1047 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 KRT37O76014 449 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 HMGCRP04035 888 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.17■□□□□ 0.18
ABCD4-226ENST00000556971 UIMC1Q96RL1 719 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 PARK7Q99497 189 aaKnown RBP16.17■□□□□ 0.18
ABCD4-226ENST00000556971 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 MIS18AQ9NYP9 233 aa16.17■□□□□ 0.18
ABCD4-226ENST00000556971 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 CYP2C8P10632 490 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 PPIL2Q13356 520 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 TTLL5Q6EMB2 1281 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 PHOX2BQ99453 314 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 PRDM12Q9H4Q4 367 aa16.16■□□□□ 0.18
ABCD4-226ENST00000556971 SPDYE2BA6NHP3 402 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 PRR33A8MZF0 331 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
ABCD4-226ENST00000556971 SPDYE6P0CI01 402 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 ATP2B4P23634 1241 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 CFAP100Q494V2 611 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 HSP90AB3PQ58FF7 597 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 RIC3Q7Z5B4 369 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 FAM89AQ96GI7 184 aa16.15■□□□□ 0.18
ABCD4-226ENST00000556971 RNPC3Q96LT9 517 aaKnown RBP16.15■□□□□ 0.18
ABCD4-226ENST00000556971 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
ABCD4-226ENST00000556971 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
ABCD4-226ENST00000556971 ADGRE1Q14246 886 aa16.14■□□□□ 0.17
ABCD4-226ENST00000556971 PRMT6Q96LA8 375 aaPredicted RBP16.14■□□□□ 0.17
ABCD4-226ENST00000556971 IGFBP4P22692 258 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 RTL5Q5HYW3 569 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-226ENST00000556971 LRP10Q7Z4F1 713 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 ZKSCAN4Q969J2 545 aaPredicted RBP16.13■□□□□ 0.17
ABCD4-226ENST00000556971 TIFAQ96CG3 184 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 TEPSINQ96N21 525 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 USP34Q70CQ2 3546 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 LRRC37A2A6NM11 1700 aa16.13■□□□□ 0.17
ABCD4-226ENST00000556971 F8W031 263 aaPredicted RBP16.12■□□□□ 0.17
ABCD4-226ENST00000556971 GTF2IP78347 998 aa16.12■□□□□ 0.17
ABCD4-226ENST00000556971 BADQ92934 168 aa16.12■□□□□ 0.17
ABCD4-226ENST00000556971 PHACTR3Q96KR7 559 aa16.12■□□□□ 0.17
ABCD4-226ENST00000556971 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
ABCD4-226ENST00000556971 EPG5Q9HCE0 2579 aa16.12■□□□□ 0.17
ABCD4-226ENST00000556971 ANXA1P04083 346 aa16.11■□□□□ 0.17
ABCD4-226ENST00000556971 ATN1P54259 1190 aaPredicted RBP16.11■□□□□ 0.17
ABCD4-226ENST00000556971 AAK1Q2M2I8 961 aa16.11■□□□□ 0.17
ABCD4-226ENST00000556971 RTF1Q92541 710 aaKnown RBP16.11■□□□□ 0.17
ABCD4-226ENST00000556971 COA7Q96BR5 231 aa16.11■□□□□ 0.17
ABCD4-226ENST00000556971 WRNIP1Q96S55 665 aa16.11■□□□□ 0.17
ABCD4-226ENST00000556971 COA1Q9GZY4 146 aa16.11■□□□□ 0.17
ABCD4-226ENST00000556971 REV3LO60673 3130 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 AK9Q5TCS8 1911 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 PI4K2BG5E9Z4 385 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 U2SURPO15042 1029 aaKnown RBP16.1■□□□□ 0.17
ABCD4-226ENST00000556971 TNFAIP1Q13829 316 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms