RNA–Protein interactions for RNA: ENST00000556849.2

PCNX1-214, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-214ENST00000556849 PTPRCP08575 1304 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 WDR33Q9C0J8 1336 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 TROQ12816 1431 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 LOC102724159A0A0B4J2E5 919 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 GOLGA8CPA6NN73 597 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 FAM177BA6PVY3 158 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ZRANB2O95218 330 aaKnown RBP eCLIP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 SLU7O95391 586 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 CAVIN2O95810 425 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 IVLP07476 585 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 CTSHP09668 335 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 FGRP09769 529 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 MAGEA9P43362 315 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ANAPC15P60006 121 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 UBE2HP62256 183 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 RACK1P63244 317 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 FOXK2Q01167 660 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 PWP2Q15269 919 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 HSP90AB3PQ58FF7 597 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ESCO1Q5FWF5 840 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 VARS2Q5ST30 1063 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 RNF187Q5TA31 235 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 INTS3Q68E01 1043 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 SRLQ86TD4 932 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 MCF2L2Q86YR7 1114 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 DHX37Q8IY37 1157 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 CCDC146Q8IYE0 955 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ARHGAP45Q92619 1136 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 EXOC4Q96A65 974 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 L2HGDHQ9H9P8 463 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 SRA1Q9HD15 236 aaKnown RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ZNF446Q9NWS9 450 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 SCHIP1Q9P0W5 487 aaPredicted RBP6.28□□□□□ -1.4
PCNX1-214ENST00000556849 JRKLQ9Y4A0 524 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 IQGAP1P46940 1657 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 PLEKHG2Q9H7P9 1386 aa6.28□□□□□ -1.4
PCNX1-214ENST00000556849 ADGRB2O60241 1585 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 GPATCH8Q9UKJ3 1502 aaKnown RBP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CCDC196A0A1B0GTZ2 297 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 RPLP1P05386 114 aaKnown RBP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 TRIM27P14373 513 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CALRP27797 417 aaKnown RBP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 SCTRP47872 440 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 KCNJ6P48051 423 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 PKP1Q13835 747 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 MTFR1Q15390 333 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 ZNF394Q53GI3 561 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CEP135Q66GS9 1140 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 FBXO38Q6PIJ6 1188 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 POTEAQ6S8J7 498 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CASC1Q6TDU7 716 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 NYAP1Q6ZVC0 841 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CERS3Q8IU89 383 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CKAP2LQ8IYA6 745 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 ZNF687Q8N1G0 1237 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 C17orf53Q8N3J3 647 aaPredicted RBP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 MKL1Q969V6 931 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 MRFAP1L1Q96HT8 127 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 SETDB2Q96T68 719 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 CFHR5Q9BXR6 569 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 DEF6Q9H4E7 631 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 QTRT2Q9H974 415 aaKnown RBP6.27□□□□□ -1.41
PCNX1-214ENST00000556849 POLIQ9UNA4 740 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 TNNQ9UQP3 1299 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 FHOD1Q9Y613 1164 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 RTL1A6NKG5 1358 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 ARHGEF5Q12774 1597 aa6.27□□□□□ -1.41
PCNX1-214ENST00000556849 C9orf84Q5VXU9 1444 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ERICH4A6NGS2 130 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ERVH48-1M5A8F1 160 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 GNRH1P01148 92 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 XRCC5P13010 732 aaKnown RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 PLA2G4AP47712 749 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 TCEAL1Q15170 157 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ZSCAN26Q16670 478 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 TTC31Q49AM3 519 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 CCDC181Q5TID7 509 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 SYT10Q6XYQ8 523 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 FILIP1Q7Z7B0 1213 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 TCP11L2Q8N4U5 519 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 UTP14AQ9BVJ6 771 aaKnown RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 SRRTQ9BXP5 876 aaKnown RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 OSBPL3Q9H4L5 887 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ARGLU1Q9NWB6 273 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 KCNG1Q9UIX4 513 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 GGT7Q9UJ14 662 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 AATKQ6ZMQ8 1374 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 USP31Q70CQ4 1352 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 RPAP1Q9BWH6 1393 aaPredicted RBP6.26□□□□□ -1.41
PCNX1-214ENST00000556849 ERCC6Q03468 1493 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 MYOM1P52179 1685 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 SHPRHQ149N8 1683 aa6.26□□□□□ -1.41
PCNX1-214ENST00000556849 TOPBP1Q92547 1522 aa6.25□□□□□ -1.41
PCNX1-214ENST00000556849 DUOX2Q9NRD8 1548 aa6.25□□□□□ -1.41
PCNX1-214ENST00000556849 A6NJY4 79 aa6.25□□□□□ -1.41
PCNX1-214ENST00000556849 PDGFAP04085 211 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms