RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
PCNX4-212ENST00000556360 LEMD3Q9Y2U8 911 aa8.78□□□□□ -1
PCNX4-212ENST00000556360 RXRBP28702 533 aa8.77□□□□□ -1.01
PCNX4-212ENST00000556360 ECM1Q16610 540 aa8.77□□□□□ -1.01
PCNX4-212ENST00000556360 METTL22Q9BUU2 404 aaPredicted RBP8.77□□□□□ -1.01
PCNX4-212ENST00000556360 ICMTO60725 284 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 ABL1P00519 1130 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 POLR3DP05423 398 aaPredicted RBP8.76□□□□□ -1.01
PCNX4-212ENST00000556360 ADH5P11766 374 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 GRIA4P48058 902 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 KIAA0319Q5VV43 1072 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 SHISA5Q8N114 240 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 GATA6Q92908 595 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 OSBPL1AQ9BXW6 950 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 PRKAG2Q9UGJ0 569 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 USTQ9Y2C2 406 aa8.76□□□□□ -1.01
PCNX4-212ENST00000556360 CARNS1A5YM72 827 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 USP11P51784 963 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 NFKBIBQ15653 356 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 HP1BP3Q5SSJ5 553 aaPredicted RBP8.75□□□□□ -1.01
PCNX4-212ENST00000556360 NFXL1Q6ZNB6 911 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 ZAR1Q86SH2 424 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 FBXL6Q8N531 539 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 YIPF2Q9BWQ6 316 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 LIN7BQ9HAP6 207 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 ANO2Q9NQ90 1003 aa8.75□□□□□ -1.01
PCNX4-212ENST00000556360 B3GALT4O96024 378 aa8.74□□□□□ -1.01
PCNX4-212ENST00000556360 CYP11A1P05108 521 aa8.74□□□□□ -1.01
PCNX4-212ENST00000556360 CTSBP07858 339 aa8.74□□□□□ -1.01
PCNX4-212ENST00000556360 ADMP35318 185 aa8.74□□□□□ -1.01
PCNX4-212ENST00000556360 GSX1Q9H4S2 264 aaPredicted RBP8.74□□□□□ -1.01
PCNX4-212ENST00000556360 ACTL7BQ9Y614 415 aa8.74□□□□□ -1.01
PCNX4-212ENST00000556360 BTBD11A6QL63 1104 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 ITPKAP23677 461 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 MAOBP27338 520 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 SPRED3Q2MJR0 410 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 VSIG10LQ86VR7 867 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 ABI1Q8IZP0 508 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 TRIM56Q9BRZ2 755 aaKnown RBP8.73□□□□□ -1.01
PCNX4-212ENST00000556360 ZFYVE1Q9HBF4 777 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 CCDC39Q9UFE4 941 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 GTF3C3Q9Y5Q9 886 aa8.73□□□□□ -1.01
PCNX4-212ENST00000556360 POU4F3Q15319 338 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 B4GALNT3Q6L9W6 998 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 FAM129BQ96TA1 746 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 ZNF576Q9H609 170 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 ACSS3Q9H6R3 686 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 RNF114Q9Y508 228 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 SYNGAP1Q96PV0 1343 aa8.72□□□□□ -1.01
PCNX4-212ENST00000556360 NEFLP07196 543 aa8.71□□□□□ -1.02
PCNX4-212ENST00000556360 ARHGAP4P98171 946 aa8.71□□□□□ -1.02
PCNX4-212ENST00000556360 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
PCNX4-212ENST00000556360 USPL1Q5W0Q7 1092 aa8.71□□□□□ -1.02
PCNX4-212ENST00000556360 CBLL1Q75N03 491 aa8.71□□□□□ -1.02
PCNX4-212ENST00000556360 BRPF3Q9ULD4 1205 aa8.71□□□□□ -1.02
PCNX4-212ENST00000556360 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.7□□□□□ -1.02
PCNX4-212ENST00000556360 MAP7Q14244 749 aa8.7□□□□□ -1.02
PCNX4-212ENST00000556360 FBXL18Q96ME1 805 aa8.7□□□□□ -1.02
PCNX4-212ENST00000556360 TBC1D32Q96NH3 1257 aa8.7□□□□□ -1.02
PCNX4-212ENST00000556360 ANGEL1Q9UNK9 670 aaKnown RBP8.7□□□□□ -1.02
PCNX4-212ENST00000556360 FAM170BA6NMN3 283 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 H3BRB1 525 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 IGHA2P01877 340 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 SEZ6L2Q6UXD5 910 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 DDX54Q8TDD1 881 aaKnown RBP8.69□□□□□ -1.02
PCNX4-212ENST00000556360 SEMA6CQ9H3T2 930 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 TUT1Q9H6E5 874 aaKnown RBP8.69□□□□□ -1.02
PCNX4-212ENST00000556360 FAM105AQ9NUU6 356 aa8.69□□□□□ -1.02
PCNX4-212ENST00000556360 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
PCNX4-212ENST00000556360 CYP26A1O43174 497 aa8.68□□□□□ -1.02
PCNX4-212ENST00000556360 SERPINB4P48594 390 aa8.68□□□□□ -1.02
PCNX4-212ENST00000556360 PDE3BQ13370 1112 aa8.68□□□□□ -1.02
PCNX4-212ENST00000556360 PRPF40BQ6NWY9 871 aaKnown RBP8.68□□□□□ -1.02
PCNX4-212ENST00000556360 CITED4Q96RK1 184 aa8.68□□□□□ -1.02
PCNX4-212ENST00000556360 CPNE3O75131 537 aaKnown RBP8.67□□□□□ -1.02
PCNX4-212ENST00000556360 ECEL1O95672 775 aa8.67□□□□□ -1.02
PCNX4-212ENST00000556360 NFICP08651 508 aa8.67□□□□□ -1.02
PCNX4-212ENST00000556360 YBX3P16989 372 aaKnown RBP eCLIP8.67□□□□□ -1.02
PCNX4-212ENST00000556360 CYP27A1Q02318 531 aa8.67□□□□□ -1.02
PCNX4-212ENST00000556360 GLYCTKQ8IVS8 523 aa8.67□□□□□ -1.02
PCNX4-212ENST00000556360 CORO1BQ9BR76 489 aa8.67□□□□□ -1.02
PCNX4-212ENST00000556360 NDUFB5O43674 189 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 ORC1Q13415 861 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 RPS26P11Q5JNZ5 115 aaPredicted RBP8.66□□□□□ -1.02
PCNX4-212ENST00000556360 DYMQ7RTS9 669 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 DNAJC25Q9H1X3 360 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 ABCB6Q9NP58 842 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 NPHS2Q9NP85 383 aa8.66□□□□□ -1.02
PCNX4-212ENST00000556360 RAB6AP20340 208 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 AP3B2Q13367 1082 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 AKAP4Q5JQC9 854 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 EHD4Q9H223 541 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 C1GALT1Q9NS00 363 aa8.65□□□□□ -1.02
PCNX4-212ENST00000556360 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
PCNX4-212ENST00000556360 AOC2O75106 756 aa8.64□□□□□ -1.03
PCNX4-212ENST00000556360 ASPAP45381 313 aa8.64□□□□□ -1.03
PCNX4-212ENST00000556360 COL19A1Q14993 1142 aa8.64□□□□□ -1.03
PCNX4-212ENST00000556360 DUSP27Q5VZP5 1158 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms