RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 EAPPQ56P03 285 aaPredicted RBP6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 NXPE4Q6UWF7 544 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 ZDHHC13Q8IUH4 622 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 GALNT11Q8NCW6 608 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 SLC7A3Q8WY07 619 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 BSNDQ8WZ55 320 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 BCO2Q9BYV7 579 aa6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 BHLHE41Q9C0J9 482 aaPredicted RBP6.4□□□□□ -1.38
SUPT16H-206ENST00000556309 FCGRTP55899 365 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 RNF43Q68DV7 783 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 VN1R5Q7Z5H4 357 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 GLIS3Q8NEA6 775 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 OSBPL7Q9BZF2 842 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 ABCB6Q9NP58 842 aa6.39□□□□□ -1.39
SUPT16H-206ENST00000556309 H3BRJ5 948 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 SOX1O00570 391 aaPredicted RBP6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 FSCN2O14926 492 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 DDX3YO15523 660 aaKnown RBP6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 MED26O95402 600 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 CABP4P57796 275 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 ALG1LQ6GMV1 187 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 GIMAP7Q8NHV1 300 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 KLHDC7BQ96G42 594 aa6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 DUSP9Q99956 384 aaKnown RBP6.38□□□□□ -1.39
SUPT16H-206ENST00000556309 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 ALX3O95076 343 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 ZNF157P51786 506 aaPredicted RBP6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 IKBKEQ14164 716 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 CPSF6Q16630 551 aaKnown RBP eCLIP6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 FAM117BQ6P1L5 589 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 ASIC4Q96FT7 647 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 KCNK4Q9NYG8 393 aa6.37□□□□□ -1.39
SUPT16H-206ENST00000556309 ESRRAP11474 423 aaPredicted RBP6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 JAG1P78504 1218 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 ZNF423Q2M1K9 1284 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 PRPF40BQ6NWY9 871 aaKnown RBP6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 DTHD1Q6ZMT9 781 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 FBXO33Q7Z6M2 555 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 CLEC10AQ8IUN9 316 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 FBF1Q8TES7 1133 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 UTP4Q969X6 686 aaKnown RBP6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 FAM161BQ96MY7 647 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 KRTAP4-9Q9BYQ8 210 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 SEC31BQ9NQW1 1179 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 ADGRE2Q9UHX3 823 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 TRAK1Q9UPV9 953 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 HIF3AQ9Y2N7 669 aa6.36□□□□□ -1.39
SUPT16H-206ENST00000556309 TM4SF5O14894 197 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 PRPF40AO75400 957 aaKnown RBP6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 WISP1O95388 367 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 NLRP12P59046 1061 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 PCDH1Q08174 1060 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 COL19A1Q14993 1142 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 POU5F2Q8N7G0 328 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 CLEC4MQ9H2X3 399 aaPredicted RBP6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 ZNF576Q9H609 170 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 PARP2Q9UGN5 583 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 AKAP2Q9Y2D5 859 aa6.35□□□□□ -1.39
SUPT16H-206ENST00000556309 ADAM11O75078 769 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 ITPKAP23677 461 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 CD68P34810 354 aaPredicted RBP6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 PIP4K2BP78356 416 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 GSTM4Q03013 218 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 C19orf57Q0VDD7 668 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 FAAP100Q0VG06 881 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 GIPC2Q8TF65 315 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 FOXD4L4Q8WXT5 416 aaPredicted RBP6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 FAM46AQ96IP4 442 aaKnown RBP6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 MYRFLQ96LU7 910 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 FAM83CQ9BQN1 747 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 BCL2L13Q9BXK5 485 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 C7orf69Q9H7B7 122 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 PPP4R2Q9NY27 417 aa6.34□□□□□ -1.39
SUPT16H-206ENST00000556309 PRR19A6NJB7 356 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 ERCC3P19447 782 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 ARMC10Q8N2F6 343 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 AGGF1Q8N302 714 aaeCLIP6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 UBASH3BQ8TF42 649 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 UBL7Q96S82 380 aaPredicted RBP6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 SPG7Q9UQ90 795 aa6.33□□□□□ -1.4
SUPT16H-206ENST00000556309 USP17L7P0C7H9 530 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 JUNBP17275 347 aaPredicted RBP6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 GNA15P30679 374 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 ARL4DP49703 201 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 XPCQ01831 940 aaPredicted RBP6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 C3orf58Q8NDZ4 430 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 FBXL18Q96ME1 805 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 USP26Q9BXU7 913 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 OSGEPQ9NPF4 335 aa6.32□□□□□ -1.4
SUPT16H-206ENST00000556309 FBXO24O75426 580 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 PSMD2Q13200 908 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 DUOXA2Q1HG44 320 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 ANKRD34AQ69YU3 496 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 ACAD11Q709F0 780 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 WNT8BQ93098 351 aa6.31□□□□□ -1.4
SUPT16H-206ENST00000556309 GPN3Q9UHW5 284 aaPredicted RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms