RNA–Protein interactions for RNA: ENST00000556272.1

PCNX1-211, Transcript of pecanex 1, humanhuman

TSL 2

Gene PCNX1, Length 2,942 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-211ENST00000556272 ATF3P18847 181 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 EIF2S2P20042 333 aaKnown RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 ESCO1Q5FWF5 840 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 RUFY3Q7L099 469 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 C9orf78Q9NZ63 289 aaPredicted RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 HMG20BQ9P0W2 317 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 NSFL1CQ9UNZ2 370 aaKnown RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 CYP46A1Q9Y6A2 500 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 ERBB3P21860 1342 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 TCHHQ07283 1943 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 NECTIN1Q15223 517 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 TSGA10IPQ3SY00 556 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 USHBP1Q8N6Y0 703 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 CLP1Q92989 425 aaKnown RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 MAP7D2Q96T17 732 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 TCEAL9Q9UHQ7 104 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 MAP3K2Q9Y2U5 619 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 C1orf167Q5SNV9 1468 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 ELP1O95163 1332 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 GRM8O00222 908 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 LILRB3O75022 631 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 PDCP20941 246 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 SYT1P21579 422 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 RNF20Q5VTR2 975 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 NUTM2GQ5VZR2 741 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 CCDC85AQ96PX6 553 aaPredicted RBP8.67□□□□□ -1.02
PCNX1-211ENST00000556272 PDRG1Q9NUG6 133 aa8.67□□□□□ -1.02
PCNX1-211ENST00000556272 MED23Q9ULK4 1368 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 TPM3P06753 285 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 TTC39BQ5VTQ0 682 aaPredicted RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 IPO4Q8TEX9 1081 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 MAP4K1Q92918 833 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 MPHOSPH6Q99547 160 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 TSPYL2Q9H2G4 693 aaPredicted RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 GCP02774 474 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 CASTP20810 708 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 HSP90AA2PQ14568 343 aaPredicted RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 LARP1Q6PKG0 1096 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 CWC27Q6UX04 472 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 MTERF4Q7Z6M4 381 aaKnown RBP8.66□□□□□ -1.02
PCNX1-211ENST00000556272 MCF2L2Q86YR7 1114 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 ORAI2Q96SN7 254 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 SWAP70Q9UH65 585 aa8.66□□□□□ -1.02
PCNX1-211ENST00000556272 LDHAP00338 332 aaKnown RBP8.65□□□□□ -1.02
PCNX1-211ENST00000556272 G3BP1Q13283 466 aaKnown RBP eCLIP8.65□□□□□ -1.02
PCNX1-211ENST00000556272 METTL3Q86U44 580 aaKnown RBP8.65□□□□□ -1.02
PCNX1-211ENST00000556272 CABLES1Q8TDN4 633 aa8.65□□□□□ -1.02
PCNX1-211ENST00000556272 SPEF2Q9C093 1822 aa8.65□□□□□ -1.02
PCNX1-211ENST00000556272 AFDNP55196 1824 aaKnown RBP8.65□□□□□ -1.02
PCNX1-211ENST00000556272 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.03
PCNX1-211ENST00000556272 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.03
PCNX1-211ENST00000556272 COL18A1P39060 1754 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 RGPD5Q99666 1765 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 LZTS3O60299 673 aaPredicted RBP8.64□□□□□ -1.03
PCNX1-211ENST00000556272 KIAA2012Q0VF49 1180 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 KRT32Q14532 448 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 GET4Q7L5D6 327 aaPredicted RBP8.64□□□□□ -1.03
PCNX1-211ENST00000556272 ANKRD24Q8TF21 1146 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 PDCL3Q9H2J4 239 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L15C9J2P7 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L10C9JJH3 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L13C9JLJ4 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L12C9JPN9 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L11C9JVI0 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L21D6R901 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L18D6R9N7 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L22D6RA61 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L17D6RBQ6 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L19D6RCP7 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L20D6RJB6 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 ENPP3O14638 875 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 SPTLC1O15269 473 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP17L24Q0WX57 530 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 NEXNQ0ZGT2 675 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 MPRIPQ6WCQ1 1025 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 JAKMIP1Q96N16 626 aaKnown RBP8.64□□□□□ -1.03
PCNX1-211ENST00000556272 MTMR6Q9Y217 621 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 KCNQ3O43525 872 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 GADD45BO75293 160 aaPredicted RBP8.64□□□□□ -1.03
PCNX1-211ENST00000556272 GJB2P29033 226 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP5P45974 858 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 ARHGAP4P98171 946 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 MTMR3Q13615 1198 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USPL1Q5W0Q7 1092 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 CREB3L3Q68CJ9 461 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 AACSQ86V21 672 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 DEPDC4Q8N2C3 294 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 FUCA2Q9BTY2 467 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 USP25Q9UHP3 1055 aa8.64□□□□□ -1.03
PCNX1-211ENST00000556272 MOXD2PA6NHM9 499 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 XRCC5P13010 732 aaKnown RBP8.63□□□□□ -1.03
PCNX1-211ENST00000556272 GNALP38405 381 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 SYCP2LQ5T4T6 812 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 SASS6Q6UVJ0 657 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 RNF34Q969K3 372 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 SUCLG2Q96I99 432 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 C8orf48Q96LL4 319 aa8.63□□□□□ -1.03
PCNX1-211ENST00000556272 RNPC3Q96LT9 517 aaKnown RBP8.63□□□□□ -1.03
PCNX1-211ENST00000556272 INO80BQ9C086 356 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms