RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 NFICP08651 508 aa7.69□□□□□ -1.18
SCFD1-218ENST00000556256 EDN3P14138 238 aa7.69□□□□□ -1.18
SCFD1-218ENST00000556256 NRSN2Q9GZP1 204 aa7.69□□□□□ -1.18
SCFD1-218ENST00000556256 PHACTR2O75167 634 aa7.68□□□□□ -1.18
SCFD1-218ENST00000556256 TNFRSF21O75509 655 aa7.68□□□□□ -1.18
SCFD1-218ENST00000556256 ADH5P11766 374 aa7.68□□□□□ -1.18
SCFD1-218ENST00000556256 EIF1AXP47813 144 aaKnown RBP7.68□□□□□ -1.18
SCFD1-218ENST00000556256 ZNF765Q7L2R6 523 aa7.68□□□□□ -1.18
SCFD1-218ENST00000556256 ACTL7BQ9Y614 415 aa7.68□□□□□ -1.18
SCFD1-218ENST00000556256 PAPLNO95428 1278 aa7.67□□□□□ -1.18
SCFD1-218ENST00000556256 CYP27A1Q02318 531 aa7.67□□□□□ -1.18
SCFD1-218ENST00000556256 PEAR1Q5VY43 1037 aaPredicted RBP7.67□□□□□ -1.18
SCFD1-218ENST00000556256 LATS2Q9NRM7 1088 aa7.67□□□□□ -1.18
SCFD1-218ENST00000556256 POLIQ9UNA4 740 aa7.67□□□□□ -1.18
SCFD1-218ENST00000556256 METTL12A8MUP2 240 aa7.66□□□□□ -1.18
SCFD1-218ENST00000556256 MPSTP25325 297 aa7.66□□□□□ -1.18
SCFD1-218ENST00000556256 MAP7Q14244 749 aa7.66□□□□□ -1.18
SCFD1-218ENST00000556256 ZNF648Q5T619 568 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-218ENST00000556256 SEMA6CQ9H3T2 930 aa7.66□□□□□ -1.18
SCFD1-218ENST00000556256 FOXD3Q9UJU5 478 aaPredicted RBP7.66□□□□□ -1.18
SCFD1-218ENST00000556256 EIF4EBP3O60516 100 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-218ENST00000556256 RAB6AP20340 208 aa7.65□□□□□ -1.18
SCFD1-218ENST00000556256 MAOBP27338 520 aa7.65□□□□□ -1.18
SCFD1-218ENST00000556256 BCL7CQ8WUZ0 217 aaPredicted RBP7.65□□□□□ -1.18
SCFD1-218ENST00000556256 CTSBP07858 339 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 ZNF423Q2M1K9 1284 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 LCE4AQ5TA78 99 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 DYMQ7RTS9 669 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 SPRED2Q7Z698 418 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 SNX29Q8TEQ0 813 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 ACSS3Q9H6R3 686 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 FAM105AQ9NUU6 356 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 SLC5A6Q9Y289 635 aa7.64□□□□□ -1.19
SCFD1-218ENST00000556256 CARMIL2Q6F5E8 1435 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 PLCL1Q15111 1095 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 ZNF574Q6ZN55 896 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-218ENST00000556256 WFDC3Q8IUB2 231 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 GTF3C2Q8WUA4 911 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-218ENST00000556256 C1GALT1Q9NS00 363 aa7.63□□□□□ -1.19
SCFD1-218ENST00000556256 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.63□□□□□ -1.19
SCFD1-218ENST00000556256 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-218ENST00000556256 DYNC1LI2O43237 492 aaPredicted RBP7.62□□□□□ -1.19
SCFD1-218ENST00000556256 CYP11A1P05108 521 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 PCDH1Q08174 1060 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 ZNF124Q15973 351 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 ZNF792Q3KQV3 632 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 ALKBH2Q6NS38 261 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 OGFOD3Q6PK18 319 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 AMOTL2Q9Y2J4 779 aa7.62□□□□□ -1.19
SCFD1-218ENST00000556256 A0A096LPE4 126 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 A0A1W2PPZ6 126 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 ASPAP45381 313 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 MTMR3Q13615 1198 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 AAMPQ13685 434 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 POU4F3Q15319 338 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 KRTAP4-2Q9BYR5 136 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 CLEC4MQ9H2X3 399 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-218ENST00000556256 GSX1Q9H4S2 264 aaPredicted RBP7.61□□□□□ -1.19
SCFD1-218ENST00000556256 RAD18Q9NS91 495 aa7.61□□□□□ -1.19
SCFD1-218ENST00000556256 BIN1O00499 593 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 EHHADHQ08426 723 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 BNIP3Q12983 259 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 SPRED3Q2MJR0 410 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 PBXIP1Q96AQ6 731 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 LGR6Q9HBX8 967 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 ZFYVE28Q9HCC9 887 aa7.6□□□□□ -1.19
SCFD1-218ENST00000556256 ECEL1O95672 775 aa7.59□□□□□ -1.19
SCFD1-218ENST00000556256 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
SCFD1-218ENST00000556256 USP5P45974 858 aa7.59□□□□□ -1.19
SCFD1-218ENST00000556256 CCNJLQ8IV13 435 aa7.59□□□□□ -1.19
SCFD1-218ENST00000556256 STK11IPQ8N1F8 1099 aa7.59□□□□□ -1.19
SCFD1-218ENST00000556256 AP4E1Q9UPM8 1137 aa7.59□□□□□ -1.19
SCFD1-218ENST00000556256 DBX1A6NMT0 343 aa7.58□□□□□ -1.2
SCFD1-218ENST00000556256 NPR3P17342 541 aa7.58□□□□□ -1.2
SCFD1-218ENST00000556256 GRIA4P48058 902 aa7.58□□□□□ -1.2
SCFD1-218ENST00000556256 HP1BP3Q5SSJ5 553 aaPredicted RBP7.58□□□□□ -1.2
SCFD1-218ENST00000556256 TRIM56Q9BRZ2 755 aaKnown RBP7.58□□□□□ -1.2
SCFD1-218ENST00000556256 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
SCFD1-218ENST00000556256 DAGLAQ9Y4D2 1042 aa7.58□□□□□ -1.2
SCFD1-218ENST00000556256 A0A1W2PP55 124 aa7.57□□□□□ -1.2
SCFD1-218ENST00000556256 FBLN7Q53RD9 439 aa7.57□□□□□ -1.2
SCFD1-218ENST00000556256 ATG4DQ86TL0 474 aaPredicted RBP7.57□□□□□ -1.2
SCFD1-218ENST00000556256 TCF12Q99081 682 aa7.57□□□□□ -1.2
SCFD1-218ENST00000556256 FZD6O60353 706 aa7.56□□□□□ -1.2
SCFD1-218ENST00000556256 FARP2O94887 1054 aaPredicted RBP7.56□□□□□ -1.2
SCFD1-218ENST00000556256 CYP27C1Q4G0S4 372 aa7.56□□□□□ -1.2
SCFD1-218ENST00000556256 GLIS3Q8NEA6 775 aa7.56□□□□□ -1.2
SCFD1-218ENST00000556256 MISP3Q96FF7 219 aa7.56□□□□□ -1.2
SCFD1-218ENST00000556256 CORO1BQ9BR76 489 aa7.56□□□□□ -1.2
SCFD1-218ENST00000556256 AOC2O75106 756 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 CD8BP10966 210 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 FUT4P22083 530 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 SPOCD1Q6ZMY3 1216 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 PLD6Q8N2A8 252 aaKnown RBP7.55□□□□□ -1.2
SCFD1-218ENST00000556256 LIN7BQ9HAP6 207 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 MBNL3Q9NUK0 354 aaKnown RBP7.55□□□□□ -1.2
SCFD1-218ENST00000556256 PPP1R9AQ9ULJ8 1098 aa7.55□□□□□ -1.2
SCFD1-218ENST00000556256 FAM13AO94988 1023 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms