RNA–Protein interactions for RNA: ENST00000556164.5

PRKCH-220, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 429 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-220ENST00000556164 USTQ9Y2C2 406 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 CACNA1FO60840 1977 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 OTOFQ9HC10 1997 aa7.47□□□□□ -1.21
PRKCH-220ENST00000556164 PI4KAP2A4QPH2 592 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 ALDH1A1P00352 501 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 IGKV5-2P06315 115 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 KLRK1P26718 216 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 IGHMBP2P38935 993 aaKnown RBP7.46□□□□□ -1.22
PRKCH-220ENST00000556164 KCNJ4P48050 445 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 GTF2IP78347 998 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 NEXNQ0ZGT2 675 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 DDX10Q13206 875 aaKnown RBP7.46□□□□□ -1.22
PRKCH-220ENST00000556164 SKIV2LQ15477 1246 aaKnown RBP7.46□□□□□ -1.22
PRKCH-220ENST00000556164 TTLL5Q6EMB2 1281 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 KSR2Q6VAB6 950 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 PI4KAP1Q8N8J0 262 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 C8orf58Q8NAV2 365 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 GCC1Q96CN9 775 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 CFHR5Q9BXR6 569 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 LEMD3Q9Y2U8 911 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 COG6Q9Y2V7 657 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 TRIM17Q9Y577 477 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 COL1A1P02452 1464 aaPredicted RBP7.46□□□□□ -1.22
PRKCH-220ENST00000556164 ZNF804BA4D1E1 1349 aa7.46□□□□□ -1.22
PRKCH-220ENST00000556164 MANSC4A6NHS7 340 aaPredicted RBP7.45□□□□□ -1.22
PRKCH-220ENST00000556164 APAF1O14727 1248 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 MMP14P50281 582 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 HIC1Q14526 733 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 DLGAP5Q15398 846 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 CWF19L2Q2TBE0 894 aaKnown RBP7.45□□□□□ -1.22
PRKCH-220ENST00000556164 LDLRAD1Q5T700 205 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 CHRDL2Q6WN34 429 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 OTOP1Q7RTM1 612 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 UBE3BQ7Z3V4 1068 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 IFNL1Q8IU54 200 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 OXER1Q8TDS5 423 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 MPHOSPH8Q99549 860 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 STK31Q9BXU1 1019 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 CHMP4AQ9BY43 222 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 ANKRD2Q9GZV1 360 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 DEFB129Q9H1M3 183 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 SSC5DA1L4H1 1573 aa7.45□□□□□ -1.22
PRKCH-220ENST00000556164 POTEFA5A3E0 1075 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 NEURL1BA8MQ27 555 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 F8W031 263 aaPredicted RBP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 IGF2BP3O00425 579 aaKnown RBP eCLIP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 PPP1R12BO60237 982 aaPredicted RBP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 ZBTB48P10074 688 aaPredicted RBP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 MS4A1P11836 297 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 ITGA6P23229 1130 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 INHBEP58166 350 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 INTS3Q68E01 1043 aaKnown RBP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 TSPYL6Q8N831 410 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 BANK1Q8NDB2 785 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 CD99L2Q8TCZ2 262 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 ZBED3Q96IU2 234 aaPredicted RBP7.44□□□□□ -1.22
PRKCH-220ENST00000556164 WNK4Q96J92 1243 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 CLMNQ96JQ2 1002 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 ARAP2Q8WZ64 1704 aa7.44□□□□□ -1.22
PRKCH-220ENST00000556164 CLRN2A0PK11 232 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 H7C1W4 665 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 MYO1BO43795 1136 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 CHRNDQ07001 517 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 MAP3K11Q16584 847 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 CCDC27Q2M243 656 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 HABP4Q5JVS0 413 aaKnown RBP7.43□□□□□ -1.22
PRKCH-220ENST00000556164 PPP1R15BQ5SWA1 713 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 OTUD7BQ6GQQ9 843 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 TSR2Q969E8 191 aaKnown RBP7.43□□□□□ -1.22
PRKCH-220ENST00000556164 ERO1AQ96HE7 468 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 VEZTQ9HBM0 779 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 CD209Q9NNX6 404 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 PCDHAC2Q9Y5I4 1007 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 PPP2R3BQ9Y5P8 575 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 MKI67P46013 3256 aaKnown RBP7.43□□□□□ -1.22
PRKCH-220ENST00000556164 HTTP42858 3142 aa7.43□□□□□ -1.22
PRKCH-220ENST00000556164 CENPFP49454 3210 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 ANKRD18BA2A2Z9 1011 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 SNAP23O00161 211 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 DPYSL4O14531 572 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 TAF5LO75529 589 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 IREB2P48200 963 aaKnown RBP7.42□□□□□ -1.22
PRKCH-220ENST00000556164 RBM5P52756 815 aaKnown RBP eCLIP7.42□□□□□ -1.22
PRKCH-220ENST00000556164 CRHR2Q13324 411 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 GCKRQ14397 625 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 SUPT20HL1Q3ZLR7 823 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 CFAP100Q494V2 611 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 NBPF12Q5TAG4 269 aaPredicted RBP7.42□□□□□ -1.22
PRKCH-220ENST00000556164 G2E3Q7L622 706 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 ZNF804AQ7Z570 1209 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 CERS5Q8N5B7 392 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 MTMR14Q8NCE2 650 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 HELBQ8NG08 1087 aaPredicted RBP7.42□□□□□ -1.22
PRKCH-220ENST00000556164 PLA2G12BQ9BX93 195 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 EFCC1Q9HA90 598 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 JAG2Q9Y219 1238 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 PTPN22Q9Y2R2 807 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 ZSWIM8A7E2V4 1837 aa7.42□□□□□ -1.22
PRKCH-220ENST00000556164 UNCXA6NJT0 531 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms