RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 IMMTQ16891 758 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 PLA2G4DQ86XP0 818 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 KHSRPQ92945 711 aaKnown RBP eCLIP8.19□□□□□ -1.15e-6■■□□□ 14.1
TDP1-213ENST00000555880 NAT10Q9H0A0 1025 aaKnown RBP8.19□□□□□ -1.1
TDP1-213ENST00000555880 KCPQ6ZWJ8 1503 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 WDR17Q8IZU2 1322 aa8.19□□□□□ -1.1
TDP1-213ENST00000555880 MYH7P12883 1935 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 BECN2A8MW95 431 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 A1BGP04217 495 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 CDC25BP30305 580 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 FKBP4Q02790 459 aaKnown RBP eCLIP8.18□□□□□ -1.1
TDP1-213ENST00000555880 FAM160A1Q05DH4 1040 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 WASHC4Q2M389 1173 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 LRRC24Q50LG9 513 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 ARSIQ5FYB1 569 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 VSIG10Q8N0Z9 540 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 ZNF594Q96JF6 807 aaPredicted RBP8.18□□□□□ -1.1
TDP1-213ENST00000555880 CLIP2Q9UDT6 1046 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 PYCARDQ9ULZ3 195 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 CARMIL3Q8ND23 1372 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 ABCC12Q96J65 1359 aa8.18□□□□□ -1.1
TDP1-213ENST00000555880 M0R2C6 588 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 CTDNEP1O95476 244 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 PDIA3P30101 505 aaKnown RBP8.17□□□□□ -1.1
TDP1-213ENST00000555880 KIF6Q6ZMV9 814 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 CCDC186Q7Z3E2 898 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 RALYLQ86SE5 291 aaKnown RBP8.17□□□□□ -1.1
TDP1-213ENST00000555880 CEP57L1Q8IYX8 460 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 FBXL16Q8N461 479 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 NCOA5Q9HCD5 579 aaKnown RBP8.17□□□□□ -1.1
TDP1-213ENST00000555880 ANO10Q9NW15 660 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 SALL1Q9NSC2 1324 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 CPLX1O14810 134 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 NEMFO60524 1076 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 IL2RBP14784 551 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 ADD1P35611 737 aaKnown RBP8.17□□□□□ -1.1
TDP1-213ENST00000555880 SF3A1Q15459 793 aaKnown RBP8.17□□□□□ -1.1
TDP1-213ENST00000555880 SARM1Q6SZW1 724 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 FSIP1Q8NA03 581 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 USP28Q96RU2 1077 aa8.17□□□□□ -1.1
TDP1-213ENST00000555880 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.17□□□□□ -1.1
TDP1-213ENST00000555880 GOLGA8BA8MQT2 603 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 EVCP57679 992 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 IFIT5Q13325 482 aaKnown RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 NKX1-1Q15270 411 aaPredicted RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 ZSCAN25Q6NSZ9 544 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 CHST3Q7LGC8 479 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 BRAPQ7Z569 592 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 NCOA7Q8NI08 942 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 KCNG4Q8TDN1 519 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 MRPS27Q92552 414 aaKnown RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 XAGE2Q96GT9 111 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 MRFAP1L1Q96HT8 127 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 C8orf76Q96K31 380 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 TEX13AQ9BXU3 409 aaPredicted RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 PUS3Q9BZE2 481 aaKnown RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 STRN4Q9NRL3 753 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 ZNF330Q9Y3S2 320 aaPredicted RBP8.16□□□□□ -1.1
TDP1-213ENST00000555880 TNS2Q63HR2 1409 aa8.16□□□□□ -1.1
TDP1-213ENST00000555880 PRC1O43663 620 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 PCCAP05165 728 aaPredicted RBP8.15□□□□□ -1.1
TDP1-213ENST00000555880 GUCY1B3Q02153 619 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 TRDNQ13061 729 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 TCIRG1Q13488 830 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 STK38Q15208 465 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 SLFNL1Q499Z3 407 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 SYNE3Q6ZMZ3 975 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 APPBP2Q92624 585 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 OSBP2Q969R2 916 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 SDF4Q9BRK5 362 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 ISCA1Q9BUE6 129 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 CCDC94Q9BW85 323 aaPredicted RBP8.15□□□□□ -1.1
TDP1-213ENST00000555880 FTOQ9C0B1 505 aaKnown RBP eCLIP8.15□□□□□ -1.1
TDP1-213ENST00000555880 GOLPH3LQ9H4A5 285 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 TMOD3Q9NYL9 352 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 RTEL1Q9NZ71 1219 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 WDR19Q8NEZ3 1342 aa8.15□□□□□ -1.1
TDP1-213ENST00000555880 NWD2Q9ULI1 1742 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 COL5A2P05997 1499 aaPredicted RBP8.15□□□□□ -1.11
TDP1-213ENST00000555880 KLF18A0A0U1RQI7 1052 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 A0A1W2PQ27 194 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 A0A1W2PQ64 194 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 A0A1W2PQD8 194 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 ZNF213O14771 459 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 HAND2P61296 217 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 TPM4P67936 248 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 TRIM28Q13263 835 aaKnown RBP8.15□□□□□ -1.11
TDP1-213ENST00000555880 SNW1Q13573 536 aaKnown RBP8.15□□□□□ -1.11
TDP1-213ENST00000555880 IQCB1Q15051 598 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 ATP2B3Q16720 1220 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 ADALQ6DHV7 355 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 TTLL5Q6EMB2 1281 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 C11orf57Q6ZUT1 292 aaPredicted RBP8.15□□□□□ -1.11
TDP1-213ENST00000555880 CARD10Q9BWT7 1032 aa8.15□□□□□ -1.11
TDP1-213ENST00000555880 SHANK3Q9BYB0 1731 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 A0A0G2JLW4 131 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 SMTNL1A8MU46 457 aa8.14□□□□□ -1.11
TDP1-213ENST00000555880 CDKL5O76039 1030 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms