RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 ORC3Q9UBD5 711 aaPredicted RBP11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 ELP1O95163 1332 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 SOS1Q07889 1333 aaPredicted RBP11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 EXOC5O00471 708 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 LARGE1O95461 756 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 FMNL1O95466 1100 aaPredicted RBP11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 KRT85P78386 507 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 PDCD2Q16342 344 aaPredicted RBP11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 ZNF772Q68DY9 489 aaPredicted RBP11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 CLEC4GQ6UXB4 293 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 ZRANB1Q9UGI0 708 aa11.88□□□□□ -0.51
EFCAB11-208ENST00000555872 USP54Q70EL1 1684 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 NCKAP5LQ9HCH0 1330 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 CPA1P15085 419 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 XBP1P17861 261 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 HSPA4P34932 840 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 FOSBP53539 338 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 GNAI1P63096 354 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 MCM6Q14566 821 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 TAX1BP1Q86VP1 789 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 UBXN6Q9BZV1 441 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 ADAM21Q9UKJ8 722 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 AATKQ6ZMQ8 1374 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 SHTN1A0MZ66 631 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 FYB1O15117 783 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 ZSCAN9O15535 394 aaPredicted RBP11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 PYGBP11216 843 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 TRIM42Q8IWZ5 723 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 EFCAB13Q8IY85 973 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 MRFAP1L1Q96HT8 127 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 EPC1Q9H2F5 836 aa11.87□□□□□ -0.51
EFCAB11-208ENST00000555872 SNUPNO95149 360 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 TBC1D8O95759 1140 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 UNC5CLQ8IV45 518 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 RBM12BQ8IXT5 1001 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 SMCR8Q8TEV9 937 aaPredicted RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 SLC27A2O14975 620 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 ACTN2P35609 894 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 MYSM1Q5VVJ2 828 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 CCDC70Q6NSX1 233 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 TEX11Q8IYF3 940 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 PPP1R13BQ96KQ4 1090 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 PHACTR3Q96KR7 559 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 TTC14Q96N46 770 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 SPATS2LQ9NUQ6 558 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 TBC1D7Q9P0N9 293 aa11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
EFCAB11-208ENST00000555872 KIF24Q5T7B8 1368 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 NR1I2O75469 434 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 STK10O94804 968 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 RBBP5Q15291 538 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 E4F1Q66K89 784 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 IL17RAQ96F46 866 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 DDX19AQ9NUU7 478 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 UTP6Q9NYH9 597 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 TFIP11Q9UBB9 837 aaKnown RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 USP6P35125 1406 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 HMMRO75330 724 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 ZNF24P17028 368 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 USP4Q13107 963 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 WDR78Q5VTH9 848 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 HOMER1Q86YM7 354 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 EXOC4Q96A65 974 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 TRIM6Q9C030 488 aaPredicted RBP11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 SNX14Q9Y5W7 946 aa11.85□□□□□ -0.51
EFCAB11-208ENST00000555872 MSH6P52701 1360 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 SSH2Q76I76 1423 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 HMOX1P09601 288 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 ZBED6P86452 979 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 SF3B2Q13435 895 aaKnown RBP11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 SARM1Q6SZW1 724 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 LEKR1Q6ZMV7 388 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 STAG2Q8N3U4 1231 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 COL3A1P02461 1466 aaPredicted RBP11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 BECN2A8MW95 431 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 ANKRD65E5RJM6 399 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 ATP8B1O43520 1251 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 IQCB1Q15051 598 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 RBM43Q6ZSC3 357 aaKnown RBP11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 GIMAP7Q8NHV1 300 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 PPM1EQ8WY54 764 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 RETREG1Q9H6L5 497 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 DNAI1Q9UI46 699 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 ITM2BQ9Y287 266 aa11.84□□□□□ -0.51
EFCAB11-208ENST00000555872 EIF3CLB5ME19 914 aaKnown RBP11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 TRPC1P48995 793 aa11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 CC2D1AQ6P1N0 951 aaPredicted RBP11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 FOXR1Q6PIV2 292 aa11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 C11orf57Q6ZUT1 292 aaPredicted RBP11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 BICD2Q8TD16 824 aa11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 PARD3BQ8TEW8 1205 aa11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 SPATA32Q96LK8 384 aa11.83□□□□□ -0.52
EFCAB11-208ENST00000555872 EIF3CQ99613 913 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms