RNA–Protein interactions for RNA: ENST00000555737.5

RCCD1-204, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 3,157 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-204ENST00000555737 ZAP70P43403 619 aa20.51■□□□□ 0.87
RCCD1-204ENST00000555737 NLRP12P59046 1061 aa20.51■□□□□ 0.87
RCCD1-204ENST00000555737 ATG9AQ7Z3C6 839 aa20.51■□□□□ 0.87
RCCD1-204ENST00000555737 NKX2-3Q8TAU0 364 aa20.51■□□□□ 0.87
RCCD1-204ENST00000555737 ZNF213O14771 459 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 IDH1O75874 414 aaKnown RBP20.5■□□□□ 0.87
RCCD1-204ENST00000555737 KLHL10Q6JEL2 608 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 HELLSQ9NRZ9 838 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 CACNA1FO60840 1977 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 PNMA6AP0CW24 399 aaPredicted RBP20.5■□□□□ 0.87
RCCD1-204ENST00000555737 EVCP57679 992 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 DSCC1Q9BVC3 393 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 IRX2Q9BZI1 471 aaPredicted RBP20.5■□□□□ 0.87
RCCD1-204ENST00000555737 LRRC37A3O60309 1634 aa20.5■□□□□ 0.87
RCCD1-204ENST00000555737 ETF1P62495 437 aaKnown RBP20.49■□□□□ 0.87
RCCD1-204ENST00000555737 KRT28Q7Z3Y7 464 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 CNNM3Q8NE01 707 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 TRDNQ13061 729 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 NCAPHQ15003 741 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 OLFM4Q6UX06 510 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 SYNE4Q8N205 404 aa20.49■□□□□ 0.87
RCCD1-204ENST00000555737 ZNF274Q96GC6 653 aaPredicted RBP20.49■□□□□ 0.87
RCCD1-204ENST00000555737 OSBPL5Q9H0X9 879 aaPredicted RBP20.49■□□□□ 0.87
RCCD1-204ENST00000555737 SKIDA1Q1XH10 827 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 CCDC158Q5M9N0 1113 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 PHKG2P15735 406 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 VPS37DQ86XT2 251 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 CHMP4CQ96CF2 233 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 FAM89AQ96GI7 184 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 ZKSCAN3Q9BRR0 538 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 CCDC66A2RUB6 948 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 B4E1Z4 1266 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 LZTFL1Q9NQ48 299 aa20.48■□□□□ 0.87
RCCD1-204ENST00000555737 SH3TC1Q8TE82 1336 aa20.47■□□□□ 0.87
RCCD1-204ENST00000555737 CCDC57Q2TAC2 916 aa20.47■□□□□ 0.87
RCCD1-204ENST00000555737 LONRF3Q496Y0 759 aa20.47■□□□□ 0.87
RCCD1-204ENST00000555737 ADGRL3Q9HAR2 1447 aa20.47■□□□□ 0.87
RCCD1-204ENST00000555737 DHX16O60231 1041 aaKnown RBP20.47■□□□□ 0.87
RCCD1-204ENST00000555737 KIF23Q02241 960 aaPredicted RBP20.47■□□□□ 0.87
RCCD1-204ENST00000555737 ARGLU1Q9NWB6 273 aaPredicted RBP20.47■□□□□ 0.87
RCCD1-204ENST00000555737 CWC25Q9NXE8 425 aaPredicted RBP20.47■□□□□ 0.87
RCCD1-204ENST00000555737 FHOD1Q9Y613 1164 aa20.47■□□□□ 0.87
RCCD1-204ENST00000555737 KIF2AO00139 706 aaPredicted RBP20.46■□□□□ 0.87
RCCD1-204ENST00000555737 FANCGO15287 622 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 METAP2P50579 478 aaKnown RBP eCLIP20.46■□□□□ 0.87
RCCD1-204ENST00000555737 STX17P56962 302 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 FOXO4P98177 505 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 WDR24Q96S15 920 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 IMPACTQ9P2X3 320 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 A0A0G2JS52 829 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 NCOA7Q8NI08 942 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 XAGE2Q96GT9 111 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 PUF60Q9UHX1 559 aaKnown RBP20.46■□□□□ 0.87
RCCD1-204ENST00000555737 HPS5Q9UPZ3 1129 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 PCDHA5Q9Y5H7 936 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 EYA2O00167 538 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 GPTP24298 496 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 CDC27P30260 824 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 PDE4BQ07343 736 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 KRT40Q6A162 431 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 SLC26A6Q9BXS9 759 aa20.46■□□□□ 0.87
RCCD1-204ENST00000555737 GPAA1O43292 621 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 PLA2G4AP47712 749 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 ANTXR2P58335 489 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 ST5P78524 1137 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 MYL5Q02045 173 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 SHC4Q6S5L8 630 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 IFNL2Q8IZJ0 200 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 KCNJ14Q9UNX9 436 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 SALL1Q9NSC2 1324 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 RGPD2P0DJD1 1756 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 NBPF26B4DH59 902 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 MTF1Q14872 753 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 AXDND1Q5T1B0 1012 aaPredicted RBP20.45■□□□□ 0.86
RCCD1-204ENST00000555737 NBPF14Q5TI25 921 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 NBPF10Q6P3W6 841 aaKnown RBP20.45■□□□□ 0.86
RCCD1-204ENST00000555737 NBPF15Q8N660 670 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 TIGD1Q96MW7 591 aa20.45■□□□□ 0.86
RCCD1-204ENST00000555737 CYP27B1O15528 508 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 IL15P40933 162 aaPredicted RBP20.44■□□□□ 0.86
RCCD1-204ENST00000555737 TRIM29Q14134 588 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 HELBQ8NG08 1087 aaPredicted RBP20.44■□□□□ 0.86
RCCD1-204ENST00000555737 A0A1W2PQ27 194 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 A0A1W2PQ64 194 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 A0A1W2PQD8 194 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 TFRCP02786 760 aaKnown RBP20.44■□□□□ 0.86
RCCD1-204ENST00000555737 HNRNPH2P55795 449 aaKnown RBP20.44■□□□□ 0.86
RCCD1-204ENST00000555737 GRIN1Q05586 938 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 TOGARAM2Q6ZUX3 1019 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 CASP1P29466 404 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 CASQ1P31415 396 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 POLR3EQ9NVU0 708 aa20.44■□□□□ 0.86
RCCD1-204ENST00000555737 RABL6Q3YEC7 729 aaPredicted RBP20.43■□□□□ 0.86
RCCD1-204ENST00000555737 SLC9C2Q5TAH2 1124 aa20.43■□□□□ 0.86
RCCD1-204ENST00000555737 PLBD2Q8NHP8 589 aa20.43■□□□□ 0.86
RCCD1-204ENST00000555737 RNF216Q9NWF9 866 aaPredicted RBP20.43■□□□□ 0.86
RCCD1-204ENST00000555737 PALLDQ8WX93 1383 aa20.43■□□□□ 0.86
RCCD1-204ENST00000555737 YEATS4O95619 227 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms