RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 FOSBP53539 338 aa18.8■□□□□ 0.6
TUBB3-209ENST00000555609 GUCY1B3Q02153 619 aa18.8■□□□□ 0.6
TUBB3-209ENST00000555609 CPLX2Q6PUV4 134 aaKnown RBP18.8■□□□□ 0.6
TUBB3-209ENST00000555609 CHST3Q7LGC8 479 aa18.8■□□□□ 0.6
TUBB3-209ENST00000555609 CCDC112Q8NEF3 446 aa18.8■□□□□ 0.6
TUBB3-209ENST00000555609 FEZ1Q99689 392 aa18.8■□□□□ 0.6
TUBB3-209ENST00000555609 DDX60Q8IY21 1712 aaKnown RBP18.79■□□□□ 0.6
TUBB3-209ENST00000555609 GPAA1O43292 621 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 ADORA1P30542 326 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 NLRP12P59046 1061 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 UBE3CQ15386 1083 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 ANO1Q5XXA6 986 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 CEP135Q66GS9 1140 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 JMYQ8N9B5 988 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 C16orf45Q96MC5 204 aaPredicted RBP18.79■□□□□ 0.6
TUBB3-209ENST00000555609 NWD2Q9ULI1 1742 aa18.79■□□□□ 0.6
TUBB3-209ENST00000555609 SKILP12757 684 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 ZAP70P43403 619 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 NDUFA8P51970 172 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 ANTXR2P58335 489 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 ATP2B3Q16720 1220 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 AOPEPQ8N6M6 819 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 CCDC150Q8NCX0 1101 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 RIPOR2Q9Y4F9 1068 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 ZMYM6O95789 1325 aa18.78■□□□□ 0.6
TUBB3-209ENST00000555609 CCDC69A6NI79 296 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 MYO1BO43795 1136 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 STARD3NLO95772 234 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 SLC3A2P08195 630 aaKnown RBP18.77■□□□□ 0.6
TUBB3-209ENST00000555609 ADD2P35612 726 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 KIF23Q02241 960 aaPredicted RBP18.77■□□□□ 0.6
TUBB3-209ENST00000555609 NYAP1Q6ZVC0 841 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 TSC1Q92574 1164 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 CLIC4Q9Y696 253 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 IKBKBO14920 756 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 NRDCO43847 1150 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 PPP6R2O75170 966 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 SLC39A14Q15043 492 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 PTPN14Q15678 1187 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 ALX1Q15699 326 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 PPP4R3BQ5MIZ7 849 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 TMEM87BQ96K49 555 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 PUS7LQ9H0K6 701 aaKnown RBP18.77■□□□□ 0.6
TUBB3-209ENST00000555609 TMOD3Q9NYL9 352 aa18.77■□□□□ 0.6
TUBB3-209ENST00000555609 ANGEL1Q9UNK9 670 aaKnown RBP18.77■□□□□ 0.6
TUBB3-209ENST00000555609 FAM237AA0A1B0GTK4 181 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 A0A1B0GVL5 298 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 UQCRFS1P1P0C7P4 283 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 CCZ1BP86790 482 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 CCZ1P86791 482 aaPredicted RBP18.76■□□□□ 0.59
TUBB3-209ENST00000555609 METTL24Q5JXM2 366 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 GIGYF2Q6Y7W6 1299 aaKnown RBP18.76■□□□□ 0.59
TUBB3-209ENST00000555609 CGNQ9P2M7 1197 aaKnown RBP18.76■□□□□ 0.59
TUBB3-209ENST00000555609 MAP3K15Q6ZN16 1313 aa18.76■□□□□ 0.59
TUBB3-209ENST00000555609 ZNF202O95125 648 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 HAND2P61296 217 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 AXDND1Q5T1B0 1012 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-209ENST00000555609 UTP14CQ5TAP6 766 aaKnown RBP18.75■□□□□ 0.59
TUBB3-209ENST00000555609 ELOA2Q8IYF1 753 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-209ENST00000555609 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 ANKRD18BA2A2Z9 1011 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 SCARF1Q14162 830 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 SOS2Q07890 1332 aaPredicted RBP18.75■□□□□ 0.59
TUBB3-209ENST00000555609 MYH7P12883 1935 aa18.75■□□□□ 0.59
TUBB3-209ENST00000555609 POLR3DP05423 398 aaPredicted RBP18.74■□□□□ 0.59
TUBB3-209ENST00000555609 NCBP1Q09161 790 aaKnown RBP18.74■□□□□ 0.59
TUBB3-209ENST00000555609 CCAR2Q8N163 923 aaKnown RBP18.74■□□□□ 0.59
TUBB3-209ENST00000555609 GPHNQ9NQX3 736 aaPredicted RBP18.74■□□□□ 0.59
TUBB3-209ENST00000555609 SHANK3Q9BYB0 1731 aa18.74■□□□□ 0.59
TUBB3-209ENST00000555609 SH2B2O14492 632 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-209ENST00000555609 LDHAL6AQ6ZMR3 332 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 TBC1D2BQ9UPU7 963 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 NEDD4P46934 1319 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 PSDA5PKW4 1024 aaPredicted RBP18.73■□□□□ 0.59
TUBB3-209ENST00000555609 CCP110O43303 1012 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 C4AP0C0L4 1744 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 C4BP0C0L5 1744 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 MCAMP43121 646 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 METAP2P50579 478 aaKnown RBP eCLIP18.73■□□□□ 0.59
TUBB3-209ENST00000555609 FILIP1Q7Z7B0 1213 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 SGMS1Q86VZ5 419 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 TTLL11Q8NHH1 800 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 FAM89AQ96GI7 184 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 AK7Q96M32 723 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 STK36Q9NRP7 1315 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 TUBE1Q9UJT0 475 aa18.73■□□□□ 0.59
TUBB3-209ENST00000555609 PFKFB1P16118 471 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 ARID4AP29374 1257 aaPredicted RBP18.72■□□□□ 0.59
TUBB3-209ENST00000555609 CTSWP56202 376 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 OTUD7BQ6GQQ9 843 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 NBPF11Q86T75 865 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 KIF18AQ8NI77 898 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 ALG1Q9BT22 464 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 GTPBP4Q9BZE4 634 aaKnown RBP18.72■□□□□ 0.59
TUBB3-209ENST00000555609 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.72■□□□□ 0.59
TUBB3-209ENST00000555609 HPSEQ9Y251 543 aa18.72■□□□□ 0.59
TUBB3-209ENST00000555609 CBFA2T2O43439 604 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 ITGA6P23229 1130 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 SLC9C2Q5TAH2 1124 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 NLRP10Q86W26 655 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms