RNA–Protein interactions for RNA: ENST00000555548.1

PAX3-210, Transcript of paired box 3, humanhuman

TSL 4

Gene PAX3, Length 458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-210ENST00000555548 KANK3Q6NY19 840 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 C16orf86Q6ZW13 317 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 DHX32Q7L7V1 743 aaKnown RBP9.41□□□□□ -0.9
PAX3-210ENST00000555548 JARID2Q92833 1246 aaPredicted RBP9.41□□□□□ -0.9
PAX3-210ENST00000555548 POLR3GLQ9BT43 218 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 BRMS1Q9HCU9 246 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 MYO15BQ96JP2 1530 aa9.41□□□□□ -0.9
PAX3-210ENST00000555548 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 MAPTP10636 758 aaKnown RBP9.4□□□□□ -0.9
PAX3-210ENST00000555548 BMP6P22004 513 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 AMPD3Q01432 767 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 UBAP2LQ14157 1087 aaKnown RBP9.4□□□□□ -0.9
PAX3-210ENST00000555548 C2orf27AQ580R0 203 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 CCDC181Q5TID7 509 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 RASIP1Q5U651 963 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 DIEXFQ68CQ4 756 aaKnown RBP9.4□□□□□ -0.9
PAX3-210ENST00000555548 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 JMYQ8N9B5 988 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 NSUN5Q96P11 429 aaKnown RBP9.4□□□□□ -0.9
PAX3-210ENST00000555548 TNKS2Q9H2K2 1166 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 CYP8B1Q9UNU6 501 aa9.4□□□□□ -0.9
PAX3-210ENST00000555548 A0A0G2JS52 829 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 TAF7LQ5H9L4 462 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 LSRQ86X29 649 aaPredicted RBP9.39□□□□□ -0.91
PAX3-210ENST00000555548 ASAP3Q8TDY4 903 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 FEZ1Q99689 392 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 PBX4Q9BYU1 374 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 DDX56Q9NY93 547 aaKnown RBP9.39□□□□□ -0.91
PAX3-210ENST00000555548 MARK1Q9P0L2 795 aa9.39□□□□□ -0.91
PAX3-210ENST00000555548 SENP3-EIF4A1A0A087X0R7 540 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 TRIM37O94972 964 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 NME2P22392 152 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 CLCQ05315 142 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 SEPT6Q14141 434 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 LRRC14Q15048 493 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 PLEKHG6Q3KR16 790 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 LARP1BQ659C4 914 aaKnown RBP9.38□□□□□ -0.91
PAX3-210ENST00000555548 GK5Q6ZS86 529 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 THAP3Q8WTV1 239 aaPredicted RBP9.38□□□□□ -0.91
PAX3-210ENST00000555548 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 EHMT1Q9H9B1 1298 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 HCN2Q9UL51 889 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 LEMD3Q9Y2U8 911 aa9.38□□□□□ -0.91
PAX3-210ENST00000555548 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
PAX3-210ENST00000555548 MTERF2Q49AM1 385 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 C19orf47Q8N9M1 422 aaKnown RBP9.37□□□□□ -0.91
PAX3-210ENST00000555548 BHMTQ93088 406 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 SLC30A3Q99726 388 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 MUC3BQ9H195 1237 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 RASSF4Q9H2L5 321 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
PAX3-210ENST00000555548 NDFIP2Q9NV92 336 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 DNMT3LQ9UJW3 386 aa9.37□□□□□ -0.91
PAX3-210ENST00000555548 LOC102724428A0A0B4J2F2 783 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 BPNT1O95861 308 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 MASP1P48740 699 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 ZNF157P51786 506 aaPredicted RBP9.36□□□□□ -0.91
PAX3-210ENST00000555548 SIK1P57059 783 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 GPLD1P80108 840 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 STAG1Q8WVM7 1258 aa9.36□□□□□ -0.91
PAX3-210ENST00000555548 EIF4G1Q04637 1599 aaKnown RBP9.36□□□□□ -0.91
PAX3-210ENST00000555548 ATE1O95260 518 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 GJB6O95452 261 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 B3GALT4O96024 378 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 VIL1P09327 827 aaKnown RBP9.35□□□□□ -0.91
PAX3-210ENST00000555548 ATP11AP98196 1134 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.35□□□□□ -0.91
PAX3-210ENST00000555548 TKFCQ3LXA3 575 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 SCARA3Q6AZY7 606 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 BSNDQ8WZ55 320 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 GAL3ST3Q96A11 431 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 NUCKS1Q9H1E3 243 aaKnown RBP9.35□□□□□ -0.91
PAX3-210ENST00000555548 PPME1Q9Y570 386 aa9.35□□□□□ -0.91
PAX3-210ENST00000555548 ARID4BQ4LE39 1312 aaPredicted RBP9.34□□□□□ -0.91
PAX3-210ENST00000555548 ZBTB42B2RXF5 422 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 BNIP3LO60238 219 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 ARNTP27540 789 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 PCDH1Q08174 1060 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 LLGL2Q6P1M3 1020 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 RIPOR1Q6ZS17 1223 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 SPNS2Q8IVW8 549 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 SULF2Q8IWU5 870 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 SYNPOQ8N3V7 929 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 ZNF669Q96BR6 464 aaPredicted RBP9.34□□□□□ -0.91
PAX3-210ENST00000555548 POP1Q99575 1024 aaKnown RBP9.34□□□□□ -0.91
PAX3-210ENST00000555548 TYW1Q9NV66 732 aaKnown RBP9.34□□□□□ -0.91
PAX3-210ENST00000555548 PCDHB14Q9Y5E9 798 aa9.34□□□□□ -0.91
PAX3-210ENST00000555548 J3QW42 95 aa9.33□□□□□ -0.92
PAX3-210ENST00000555548 BMP1P13497 986 aa9.33□□□□□ -0.92
PAX3-210ENST00000555548 RPL6Q02878 288 aaKnown RBP9.33□□□□□ -0.92
PAX3-210ENST00000555548 TCEA2Q15560 299 aa9.33□□□□□ -0.92
PAX3-210ENST00000555548 RAB44Q7Z6P3 723 aaPredicted RBP9.33□□□□□ -0.92
PAX3-210ENST00000555548 ST13P5Q8NFI4 369 aaPredicted RBP9.33□□□□□ -0.92
PAX3-210ENST00000555548 STK35Q8TDR2 534 aa9.33□□□□□ -0.92
PAX3-210ENST00000555548 EMILIN2Q9BXX0 1053 aa9.33□□□□□ -0.92
PAX3-210ENST00000555548 KDM2BQ8NHM5 1336 aa9.32□□□□□ -0.92
PAX3-210ENST00000555548 H7C1W4 665 aa9.32□□□□□ -0.92
PAX3-210ENST00000555548 DIAPH1O60610 1272 aaKnown RBP9.32□□□□□ -0.92
PAX3-210ENST00000555548 PPP2R5EQ16537 467 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms