RNA–Protein interactions for RNA: ENST00000555489.5

RPGRIP1-208, Transcript of RPGR interacting protein 1, humanhuman

TSL 1 (best)

Gene RPGRIP1, Length 2,139 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-208ENST00000555489 CPLX2Q6PUV4 134 aaKnown RBP11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 FMR1NBQ8N0W7 255 aaPredicted RBP11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 C17orf53Q8N3J3 647 aaPredicted RBP11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 PCDHA7Q9UN72 937 aa11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 LRP5O75197 1615 aa11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 DISP2A7MBM2 1401 aa11.59□□□□□ -0.55
RPGRIP1-208ENST00000555489 ITGB4P16144 1822 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 MROH5Q6ZUA9 1318 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 GPTP24298 496 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 RBM10P98175 930 aaKnown RBP11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZRSR1Q15695 479 aaKnown RBP11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 HLFQ16534 295 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 SYNE3Q6ZMZ3 975 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 TMEM87BQ96K49 555 aa11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 TRMT112Q9UI30 125 aaKnown RBP11.58□□□□□ -0.56
RPGRIP1-208ENST00000555489 IL6STP40189 918 aaPredicted RBP11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 PUM3Q15397 648 aaKnown RBP11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 PI16Q6UXB8 463 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 C11orf57Q6ZUT1 292 aaPredicted RBP11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 LPIN2Q92539 896 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 SDF4Q9BRK5 362 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 PLCH1Q4KWH8 1693 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 AKAP11Q9UKA4 1901 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 SPTLC2O15270 562 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 CCDC102BQ68D86 513 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 BPIFA3Q9BQP9 254 aa11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 GPHNQ9NQX3 736 aaPredicted RBP11.57□□□□□ -0.56
RPGRIP1-208ENST00000555489 IDH1O75874 414 aaKnown RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 METAP2P50579 478 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 KIF23Q02241 960 aaPredicted RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 ALX1Q15699 326 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 BTG4Q9NY30 223 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 ARAP2Q8WZ64 1704 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 COL14A1Q05707 1796 aaKnown RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 STRCQ7RTU9 1775 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 C4AP0C0L4 1744 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 C4BP0C0L5 1744 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 SH2B2O14492 632 aaPredicted RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 DHX8Q14562 1220 aaKnown RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 DZIP3Q86Y13 1208 aaKnown RBP11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 JMYQ8N9B5 988 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 KIAA1468Q9P260 1216 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZBTB1Q9Y2K1 713 aa11.56□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZNF532Q9HCE3 1301 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 APPP05067 770 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 POLR3DP05423 398 aaPredicted RBP11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 PDE6AP16499 860 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 NDUFA8P51970 172 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 ANO1Q5XXA6 986 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 APOA5Q6Q788 366 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 SGMS1Q86VZ5 419 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 DHX40Q8IX18 779 aaKnown RBP11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 SYNE4Q8N205 404 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 CNNM2Q9H8M5 875 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 PIH1D3Q9NQM4 214 aaKnown RBP11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 CLIC4Q9Y696 253 aa11.55□□□□□ -0.56
RPGRIP1-208ENST00000555489 A0A1B0GVL5 298 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 TCRBV5S4A2TA0A5A2 114 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 PPFIA3O75145 1194 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 SLC5A1P13866 664 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 FGFR2P21802 821 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 CMA1P23946 247 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 PHKA1P46020 1223 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 TPM4P67936 248 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 RBM6P78332 1123 aaKnown RBP11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 MAP3K12Q12852 859 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 TBC1D10CQ8IV04 446 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZNF34Q8IZ26 560 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 NRBP1Q9UHY1 535 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 EXOC5O00471 708 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 PPP6R2O75170 966 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 LIFRP42702 1097 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 GSDMDP57764 484 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 SLC39A14Q15043 492 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 OTUD7BQ6GQQ9 843 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 LRRC8AQ8IWT6 810 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 TIGD1Q96MW7 591 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 SLC4A9Q96Q91 983 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 STRBPQ96SI9 672 aaKnown RBP11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 ALG1Q9BT22 464 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 NUP98P52948 1817 aa11.54□□□□□ -0.56
RPGRIP1-208ENST00000555489 PATL2C9JE40 543 aaKnown RBP11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZBTB43O43298 467 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 SLC3A2P08195 630 aaKnown RBP11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 GNAT2P19087 354 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 LRMPQ12912 555 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 TRIM29Q14134 588 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 SPATA5Q8NB90 893 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 MTA3Q9BTC8 594 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 IMPACTQ9P2X3 320 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 PAXBP1Q9Y5B6 917 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 STK36Q9NRP7 1315 aa11.53□□□□□ -0.56
RPGRIP1-208ENST00000555489 ZNF202O95125 648 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms