RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 AOPEPQ8N6M6 819 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 RAB3IPQ96QF0 476 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GOLGA6AQ9NYA3 693 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 TFCP2L1Q9NZI6 479 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 GBP1P32455 592 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 KIFAP3Q92845 792 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 RIOK1Q9BRS2 568 aaKnown RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 ARFGAP3Q9NP61 516 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 DDX39AO00148 427 aaKnown RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 NEDD9Q14511 834 aa7.72□□□□□ -1.17
SYNE2-216ENST00000555002 BAG1Q99933 345 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-216ENST00000555002 CADPSQ9ULU8 1353 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 SPDYE2BA6NHP3 402 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 SPDYE6P0CI01 402 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 INPP1P49441 399 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 STX17P56962 302 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 CHRNA2Q15822 529 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 ZYXQ15942 572 aaKnown RBP7.71□□□□□ -1.17
SYNE2-216ENST00000555002 GIMAP6Q6P9H5 292 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 IFT74Q96LB3 600 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 ITM2BQ9Y287 266 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 SYT1P21579 422 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 MAEAQ7L5Y9 396 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 GPR161Q8N6U8 529 aaKnown RBP7.71□□□□□ -1.17
SYNE2-216ENST00000555002 FANCD2Q9BXW9 1451 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 ANO6Q4KMQ2 910 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 LIN9Q5TKA1 542 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 DCLK2Q8N568 766 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 MCUR1Q96AQ8 359 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 CNPY2Q9Y2B0 182 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 GAPVD1Q14C86 1478 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 PLEKHH2Q8IVE3 1493 aa7.71□□□□□ -1.17
SYNE2-216ENST00000555002 TTC31Q49AM3 519 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 SCYL1Q96KG9 808 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 LZTFL1Q9NQ48 299 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 SKAP1Q86WV1 359 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 ANKRD24Q8TF21 1146 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 ARHGEF2Q92974 986 aaKnown RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 MTUS1Q9ULD2 1270 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 BZW2Q9Y6E2 419 aaKnown RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 MAGEB6Q8N7X4 407 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 PPFIBP2Q8ND30 876 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 RNF217Q8TC41 542 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 SPATA17Q96L03 361 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 BICDL2A1A5D9 508 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 CALCOCO2Q13137 446 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 UTP14CQ5TAP6 766 aaKnown RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 TTC30AQ86WT1 665 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 MYO10Q9HD67 2058 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 FAM135AQ9P2D6 1515 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 KRT79Q5XKE5 535 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 SEPT8Q92599 483 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 RSRC1Q96IZ7 334 aaKnown RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 CCDC42Q96M95 316 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 XAB2Q9HCS7 855 aaKnown RBP7.71□□□□□ -1.18
SYNE2-216ENST00000555002 IVNS1ABPQ9Y6Y0 642 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 ZNF853P0CG23 659 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 STMN1P16949 149 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 CCDC122Q5T0U0 273 aa7.71□□□□□ -1.18
SYNE2-216ENST00000555002 MGEA5O60502 916 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 CASP2P42575 452 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 SMTNP53814 917 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 IFRD2Q12894 506 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 PPP2R5AQ15172 486 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 C9orf84Q5VXU9 1444 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 IVLP07476 585 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 STRN3Q13033 797 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 KRT222Q8N1A0 295 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 FOXO3O43524 673 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 TRAF1Q13077 416 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 RPS6KA2Q15349 733 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 ACBD5Q5T8D3 534 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 KSR1Q8IVT5 923 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 PPP1R12CQ9BZL4 782 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 PARP1P09874 1014 aaKnown RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 ECHDC1Q9NTX5 307 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 RBBP5Q15291 538 aaKnown RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 MIGA1Q8NAN2 632 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 TCEANC2Q96MN5 208 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 HAUS2Q9NVX0 235 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 ANXA1P04083 346 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 FAM47CQ5HY64 1035 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 NXNQ6DKJ4 435 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 ZNF569Q5MCW4 686 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 TRIM31Q9BZY9 425 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 MCM9Q9NXL9 1143 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 NBPF8Q3BBV2 869 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 NBPF14Q5TI25 921 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 CACNA2D3Q8IZS8 1091 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 TOP2AP11388 1531 aaKnown RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 BUB1BO60566 1050 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-216ENST00000555002 CNGA1P29973 690 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 GNAQP50148 359 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 SLC12A2P55011 1212 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 NME9Q86XW9 330 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 CSRNP2Q9H175 543 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 VCXQ9H320 206 aa7.7□□□□□ -1.18
SYNE2-216ENST00000555002 SKILP12757 684 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms