RNA–Protein interactions for RNA: ENST00000554980.5

TGFB3-202, Transcript of transforming growth factor beta 3, humanhuman

TSL 2

Gene TGFB3, Length 2,708 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-202ENST00000554980 ENPP1P22413 925 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 GNALP38405 381 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 ODR4Q5SWX8 454 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 MIGA1Q8NAN2 632 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 TDRD7Q8NHU6 1098 aaKnown RBP8.68□□□□□ -1.02
TGFB3-202ENST00000554980 TEKT1Q969V4 418 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 FLT4P35916 1363 aa8.68□□□□□ -1.02
TGFB3-202ENST00000554980 PPFIA2O75334 1257 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 VAMP4O75379 141 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 TOMM20Q15388 145 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 C10orf62Q5T681 223 aaPredicted RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 DHX36Q9H2U1 1008 aaKnown RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 KMT5AQ9NQR1 393 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 ITM2BQ9Y287 266 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 RTL1A6NKG5 1358 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 SHTN1A0MZ66 631 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 TMEM110-MUSTN1A8MSY1 372 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 BCL9O00512 1426 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 CHL1O00533 1208 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 ALKBH2Q6NS38 261 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 GIMAP1Q8WWP7 306 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 PCMTD1Q96MG8 357 aaPredicted RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 EYA1Q99502 592 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 POLG2Q9UHN1 485 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 STK25O00506 426 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 PLSCR1O15162 318 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 PER1O15534 1290 aaPredicted RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 KCNJ4P48050 445 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 MARSP56192 900 aaKnown RBP8.67□□□□□ -1.02
TGFB3-202ENST00000554980 CTR9Q6PD62 1173 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 C17orf50Q8WW18 174 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 CHMP3Q9Y3E7 222 aa8.67□□□□□ -1.02
TGFB3-202ENST00000554980 CAND2O75155 1236 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 PRIM1P49642 420 aaKnown RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 EIF4A2Q14240 407 aaKnown RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 PPP2R5BQ15173 497 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 LMBRD2Q68DH5 695 aaPredicted RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 SAMD14Q8IZD0 417 aaPredicted RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 NOL10Q9BSC4 688 aaKnown RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 TINF2Q9BSI4 451 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 BRMS1Q9HCU9 246 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 LRRC4BQ9NT99 713 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 ANKRD26Q9UPS8 1709 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 SLC27A2O14975 620 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 CYP27B1O15528 508 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 BBOX1O75936 387 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 PDGFRBP09619 1106 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 HOXD10P28358 340 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 RAD51AP2Q09MP3 1159 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 TXNRD1Q16881 649 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 ZNF746Q6NUN9 644 aaPredicted RBP8.66□□□□□ -1.02
TGFB3-202ENST00000554980 MORC1Q86VD1 984 aa8.66□□□□□ -1.02
TGFB3-202ENST00000554980 ESPNB1AK53 854 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 RPN1P04843 607 aaKnown RBP8.65□□□□□ -1.02
TGFB3-202ENST00000554980 GTF2A1P52655 376 aaPredicted RBP8.65□□□□□ -1.02
TGFB3-202ENST00000554980 TAF11Q15544 211 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 ANKRD45Q5TZF3 282 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 JAKMIP3Q5VZ66 844 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 TAX1BP1Q86VP1 789 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 PPM1EQ8WY54 764 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 BHMTQ93088 406 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 SYTL4Q96C24 671 aaPredicted RBP8.65□□□□□ -1.02
TGFB3-202ENST00000554980 TTC14Q96N46 770 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 MAP3K14Q99558 947 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 BTAF1O14981 1849 aa8.65□□□□□ -1.02
TGFB3-202ENST00000554980 NHSQ6T4R5 1651 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.03
TGFB3-202ENST00000554980 SRGNP10124 158 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 IL4RP24394 825 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 XPO4Q9C0E2 1151 aaKnown RBP8.65□□□□□ -1.03
TGFB3-202ENST00000554980 PPP4R2Q9NY27 417 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 TMOD4Q9NZQ9 345 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 IKBKGQ9Y6K9 419 aa8.65□□□□□ -1.03
TGFB3-202ENST00000554980 NSD2O96028 1365 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 AMPD3Q01432 767 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 ZSCAN26Q16670 478 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 CCSAPQ6IQ19 270 aaPredicted RBP8.64□□□□□ -1.03
TGFB3-202ENST00000554980 HELQQ8TDG4 1101 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
TGFB3-202ENST00000554980 TMEM87BQ96K49 555 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 IWS1Q96ST2 819 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 KIF2CQ99661 725 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 IER2Q9BTL4 223 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 DCAF16Q9NXF7 216 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 U3KPZ7 1027 aaPredicted RBP8.64□□□□□ -1.03
TGFB3-202ENST00000554980 H0YHG0 523 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 NPHP1O15259 732 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 RPL17P18621 184 aaKnown RBP8.64□□□□□ -1.03
TGFB3-202ENST00000554980 HOXC13P31276 330 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 SARNPP82979 210 aaKnown RBP8.64□□□□□ -1.03
TGFB3-202ENST00000554980 SLC7A5Q01650 507 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 TRIM29Q14134 588 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 NFXL1Q6ZNB6 911 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 NELL1Q92832 810 aa8.64□□□□□ -1.03
TGFB3-202ENST00000554980 TRMT1Q9NXH9 659 aaKnown RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms