RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 MCOLN1Q9GZU1 580 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 TDRD3Q9H7E2 651 aaKnown RBP13.88□□□□□ -0.19
ABCD4-221ENST00000554453 VEZTQ9HBM0 779 aa13.88□□□□□ -0.19
ABCD4-221ENST00000554453 LRRFIP2Q9Y608 721 aaKnown RBP13.88□□□□□ -0.19
ABCD4-221ENST00000554453 COL1A1P02452 1464 aaPredicted RBP13.87□□□□□ -0.19
ABCD4-221ENST00000554453 GNAI3P08754 354 aa13.87□□□□□ -0.19
ABCD4-221ENST00000554453 SLC5A1P13866 664 aa13.87□□□□□ -0.19
ABCD4-221ENST00000554453 MIER1Q8N108 512 aa13.87□□□□□ -0.19
ABCD4-221ENST00000554453 MEIS3Q99687 375 aa13.87□□□□□ -0.19
ABCD4-221ENST00000554453 COPRSQ9NQ92 184 aa13.87□□□□□ -0.19
ABCD4-221ENST00000554453 ECM29Q5VYK3 1845 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 ZBTB22O15209 634 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 IL15P40933 162 aaPredicted RBP13.86□□□□□ -0.19
ABCD4-221ENST00000554453 INHBEP58166 350 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 DGKZQ13574 1117 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 WDR66Q8TBY9 1149 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 FZD1Q9UP38 647 aa13.86□□□□□ -0.19
ABCD4-221ENST00000554453 BCAR3O75815 825 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 IREB2P48200 963 aaKnown RBP13.85□□□□□ -0.19
ABCD4-221ENST00000554453 SREBF2Q12772 1141 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 NOM1Q5C9Z4 860 aaKnown RBP13.85□□□□□ -0.19
ABCD4-221ENST00000554453 DIEXFQ68CQ4 756 aaKnown RBP13.85□□□□□ -0.19
ABCD4-221ENST00000554453 HHIPL2Q6UWX4 724 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 TEKT1Q969V4 418 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 ZDHHC15Q96MV8 337 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 TEPSINQ96N21 525 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 SIL1Q9H173 461 aa13.85□□□□□ -0.19
ABCD4-221ENST00000554453 PA2G4Q9UQ80 394 aaKnown RBP13.85□□□□□ -0.19
ABCD4-221ENST00000554453 CCDC85CA6NKD9 419 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 ZBTB48P10074 688 aaPredicted RBP13.84□□□□□ -0.19
ABCD4-221ENST00000554453 TRIM27P14373 513 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 TNNI2P48788 182 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 MKRN3Q13064 507 aaKnown RBP13.84□□□□□ -0.19
ABCD4-221ENST00000554453 MTX1Q13505 466 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 FKBP1CQ5VVH2 108 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 APOBEC3HQ6NTF7 200 aaKnown RBP13.84□□□□□ -0.19
ABCD4-221ENST00000554453 ATF7IPQ6VMQ6 1270 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 CFHR5Q9BXR6 569 aa13.84□□□□□ -0.19
ABCD4-221ENST00000554453 GNL3LQ9NVN8 582 aaKnown RBP13.84□□□□□ -0.19
ABCD4-221ENST00000554453 MANSC4A6NHS7 340 aaPredicted RBP13.83□□□□□ -0.2
ABCD4-221ENST00000554453 TCP10L2B9ZVM9 353 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 TBC1D8O95759 1140 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 ALDH1A1P00352 501 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 ANKRD13AQ8IZ07 590 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 WNK4Q96J92 1243 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 CLMNQ96JQ2 1002 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 MAST3O60307 1309 aa13.83□□□□□ -0.2
ABCD4-221ENST00000554453 SEMA3EO15041 775 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 RGS19P49795 217 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 MAP3K9P80192 1104 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 FAM83AQ86UY5 434 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 FRAT1Q92837 279 aaPredicted RBP13.82□□□□□ -0.2
ABCD4-221ENST00000554453 TMEM39BQ9GZU3 492 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 DENND2AQ9ULE3 1009 aa13.82□□□□□ -0.2
ABCD4-221ENST00000554453 SSC5DA1L4H1 1573 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 GPR25O00155 361 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 SRGAP3O43295 1099 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 TIMM10P62072 90 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 HNRNPUQ00839 825 aaKnown RBP eCLIP13.81□□□□□ -0.2
ABCD4-221ENST00000554453 CTU1Q7Z7A3 348 aaKnown RBP13.81□□□□□ -0.2
ABCD4-221ENST00000554453 IFNL1Q8IU54 200 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
ABCD4-221ENST00000554453 TNNQ9UQP3 1299 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 AKAP2Q9Y2D5 859 aa13.81□□□□□ -0.2
ABCD4-221ENST00000554453 TESPA1A2RU30 521 aaPredicted RBP13.8□□□□□ -0.2
ABCD4-221ENST00000554453 GNAI2P04899 355 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 GJA5P36382 358 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 PHKA1P46020 1223 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 PKN2Q16513 984 aaKnown RBP13.8□□□□□ -0.2
ABCD4-221ENST00000554453 ZKSCAN2Q63HK3 967 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.8□□□□□ -0.2
ABCD4-221ENST00000554453 CDAN1Q8IWY9 1227 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 CLUAP1Q96AJ1 413 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 R3HDMLQ9H3Y0 253 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 TMOD2Q9NZR1 351 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 SALL1Q9NSC2 1324 aa13.8□□□□□ -0.2
ABCD4-221ENST00000554453 LDHBP07195 334 aaKnown RBP13.79□□□□□ -0.2
ABCD4-221ENST00000554453 ADORA1P30542 326 aa13.79□□□□□ -0.2
ABCD4-221ENST00000554453 CACNB3P54284 484 aa13.79□□□□□ -0.2
ABCD4-221ENST00000554453 CCDC102BQ68D86 513 aa13.79□□□□□ -0.2
ABCD4-221ENST00000554453 OTUD7BQ6GQQ9 843 aa13.79□□□□□ -0.2
ABCD4-221ENST00000554453 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.79□□□□□ -0.2
ABCD4-221ENST00000554453 FKTNO75072 461 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 PRDX5P30044 214 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 TFCP2Q12800 502 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 CDC42EP5Q6NZY7 148 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.78□□□□□ -0.22e-6■■■□□ 15.6
ABCD4-221ENST00000554453 HOOK2Q96ED9 719 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 FAM163AQ96GL9 167 aaPredicted RBP13.78□□□□□ -0.2
ABCD4-221ENST00000554453 XAGE2Q96GT9 111 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 MS4A4AQ96JQ5 239 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 DAGLAQ9Y4D2 1042 aa13.78□□□□□ -0.2
ABCD4-221ENST00000554453 PNMA6EA0A0J9YXQ4 647 aa13.77□□□□□ -0.21
ABCD4-221ENST00000554453 A0A1B0GUL7 405 aa13.77□□□□□ -0.21
ABCD4-221ENST00000554453 IGF2BP3O00425 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
ABCD4-221ENST00000554453 ATP8B2P98198 1209 aa13.77□□□□□ -0.21
ABCD4-221ENST00000554453 G3BP1Q13283 466 aaKnown RBP eCLIP13.77□□□□□ -0.21
ABCD4-221ENST00000554453 AK9Q5TCS8 1911 aa13.77□□□□□ -0.21
ABCD4-221ENST00000554453 ZGPATQ8N5A5 531 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms