RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 TRPM1Q7Z4N2 1603 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 IFT172Q9UG01 1749 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 NRKQ7Z2Y5 1582 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 GOLIM4O00461 696 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 GNAI2P04899 355 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PCCAP05165 728 aaPredicted RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 PRDX5P30044 214 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ADORA1P30542 326 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TNNI2P48788 182 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 KIAA2012Q0VF49 1180 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TFCP2Q12800 502 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 SPICE1Q8N0Z3 855 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CPXCR1Q8N123 301 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CLASRPQ8N2M8 674 aaKnown RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TEKT1Q969V4 418 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 EDC3Q96F86 508 aaKnown RBP3.06□□□□□ -1.92
PRPF39-205ENST00000554081 CSRNP1Q96S65 589 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 TMEM106CQ9BVX2 250 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 RCAN3Q9UKA8 241 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 ZHX2Q9Y6X8 837 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 LAMC1P11047 1609 aa3.06□□□□□ -1.92
PRPF39-205ENST00000554081 MAP2P11137 1827 aaKnown RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PIK3C2AO00443 1686 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 KIF24Q5T7B8 1368 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 YDJCA8MPS7 323 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 GDF11O95390 407 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 GNAI3P08754 354 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 CYP7A1P22680 504 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PHKA1P46020 1223 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 KIF22Q14807 665 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PDIA6Q15084 440 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 TEX11Q8IYF3 940 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 TGFBRAP1Q8WUH2 860 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PPM1EQ8WY54 764 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 CRAMP1Q96RY5 1269 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 HOMER2Q9NSB8 354 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 CPA4Q9UI42 421 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 HDAC5Q9UQL6 1122 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PLCH1Q4KWH8 1693 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 A0A1B0GUL7 405 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 WNT10BO00744 389 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 MAP3K13O43283 966 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PPFIA3O75145 1194 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 PRDM1O75626 825 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 CTCFP49711 727 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 MAP2K1Q02750 393 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 SUPT20HL1Q3ZLR7 823 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 OTUD7BQ6GQQ9 843 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 NAA16Q6N069 864 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 RSBN1LQ6PCB5 846 aaPredicted RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 AMOTL1Q8IY63 956 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 CDCA5Q96FF9 252 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 FAM161BQ96MY7 647 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 LNPKQ9C0E8 428 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 TSHZ2Q9NRE2 1034 aa3.05□□□□□ -1.92
PRPF39-205ENST00000554081 RIF1Q5UIP0 2472 aaKnown RBP3.05□□□□□ -1.92
PRPF39-205ENST00000554081 ITSN1Q15811 1721 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 GON4LQ3T8J9 2241 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 RANBP2P49792 3224 aaKnown RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CCL15-CCL14A0A0B4J2E2 113 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 PEX10O60683 326 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 HMMRO75330 724 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 IREB2P48200 963 aaKnown RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 HIRAP54198 1017 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 IRX3P78415 501 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 PTPN12Q05209 780 aaKnown RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SPP2Q13103 211 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CCL15Q16663 113 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SLFNL1Q499Z3 407 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 RGMBQ6NW40 437 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 RBM46Q8TBY0 533 aaKnown RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 RAET1EQ8TD07 263 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 MKNK2Q9HBH9 465 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 PALD1Q9ULE6 856 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 PDZRN3Q9UPQ7 1066 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 ADCY9O60503 1353 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 NFAT5O94916 1531 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SORBS3O60504 671 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 TRIM27P14373 513 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 INPP5BP32019 993 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CRKP46108 304 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 TDO2P48775 406 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 NOGQ13253 232 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 TNFAIP1Q13829 316 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 ATF7IPQ6VMQ6 1270 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CCDC82Q8N4S0 544 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 L3MBTL3Q96JM7 780 aaPredicted RBP3.04□□□□□ -1.92
PRPF39-205ENST00000554081 DBNDD2Q9BQY9 259 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 FSD1Q9BTV5 496 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 TANGO6Q9C0B7 1094 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 EFCC1Q9HA90 598 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 VAT1LQ9HCJ6 419 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 MCM9Q9NXL9 1143 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 STX8Q9UNK0 236 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 EYA2O00167 538 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CYP2C8P10632 490 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 CYP2B6P20813 491 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 HAND2P61296 217 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SLC9C1Q4G0N8 1177 aa3.04□□□□□ -1.92
PRPF39-205ENST00000554081 SLC9C2Q5TAH2 1124 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms