RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 FAM13BQ9NYF5 915 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 CDK11AQ9UQ88 783 aaPredicted RBP5.2□□□□□ -1.58
SLIRP-202ENST00000553981 RAXQ9Y2V3 346 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 KIAA1107Q9UPP5 1409 aa5.2□□□□□ -1.58
SLIRP-202ENST00000553981 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.19□□□□□ -1.58
SLIRP-202ENST00000553981 XIRP1Q702N8 1843 aaKnown RBP5.19□□□□□ -1.58
SLIRP-202ENST00000553981 TM4SF5O14894 197 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 WISP1O95388 367 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 ZAP70P43403 619 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 CD97P48960 835 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 PIP4K2BP78356 416 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 HYAL2Q12891 473 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 NAA30Q147X3 362 aaPredicted RBP5.19□□□□□ -1.58
SLIRP-202ENST00000553981 CEP135Q66GS9 1140 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 TXNDC11Q6PKC3 985 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 KCNK4Q9NYG8 393 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 CXXC1Q9P0U4 656 aaPredicted RBP5.19□□□□□ -1.58
SLIRP-202ENST00000553981 POLR1AO95602 1720 aaPredicted RBP5.19□□□□□ -1.58
SLIRP-202ENST00000553981 CCDC18Q5T9S5 1454 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 SHANK2Q9UPX8 1470 aa5.19□□□□□ -1.58
SLIRP-202ENST00000553981 DHX29Q7Z478 1369 aaKnown RBP5.18□□□□□ -1.58
SLIRP-202ENST00000553981 SMNDC1O75940 238 aaKnown RBP eCLIP5.18□□□□□ -1.58
SLIRP-202ENST00000553981 KIF4AO95239 1232 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 IGLV1-40P01703 118 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 CD68P34810 354 aaPredicted RBP5.18□□□□□ -1.58
SLIRP-202ENST00000553981 MCTP1Q6DN14 999 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 ARMC10Q8N2F6 343 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 GPR152Q8TDT2 470 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 SPACA7Q96KW9 195 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 RASSF4Q9H2L5 321 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 FYCO1Q9BQS8 1478 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 ZC3H13Q5T200 1668 aaKnown RBP5.18□□□□□ -1.58
SLIRP-202ENST00000553981 LRRC7Q96NW7 1537 aa5.18□□□□□ -1.58
SLIRP-202ENST00000553981 MROH1Q8NDA8 1641 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 ZBTB39O15060 712 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 GSC2O15499 205 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 PTCD1O75127 700 aaKnown RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 MED26O95402 600 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 CDC27P30260 824 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 CDC25BP30305 580 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 SCNN1AP37088 669 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 SRPK2P78362 688 aaKnown RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 TTC39BQ5VTQ0 682 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 ACAD11Q709F0 780 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 CARD10Q9BWT7 1032 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 ABI2Q9NYB9 513 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 STOML1Q9UBI4 398 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 CFDP1Q9UEE9 299 aaPredicted RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 FNDC3AQ9Y2H6 1198 aaKnown RBP5.17□□□□□ -1.58
SLIRP-202ENST00000553981 MED14O60244 1454 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 PZPP20742 1482 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 NCOA2Q15596 1464 aa5.17□□□□□ -1.58
SLIRP-202ENST00000553981 TNRQ92752 1358 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 MIA2Q96PC5 1412 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-202ENST00000553981 FSCN2O14926 492 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 KIF3BO15066 747 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 DHX15O43143 795 aaKnown RBP5.16□□□□□ -1.58
SLIRP-202ENST00000553981 TGFB1P01137 390 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 CYP2E1P05181 493 aaPredicted RBP5.16□□□□□ -1.58
SLIRP-202ENST00000553981 LTKP29376 864 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 TMEM164Q5U3C3 297 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 KIAA1211Q6ZU35 1233 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 KRTAP19-1Q8IUB9 90 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 CEP120Q8N960 986 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 CEP41Q9BYV8 373 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 STIM2Q9P246 746 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 CCNB3Q8WWL7 1395 aa5.16□□□□□ -1.58
SLIRP-202ENST00000553981 RTEL1-TNFRSF6BF6WH68 1400 aa5.15□□□□□ -1.58
SLIRP-202ENST00000553981 NPHP4O75161 1426 aaPredicted RBP5.15□□□□□ -1.58
SLIRP-202ENST00000553981 CFAP65Q6ZU64 1925 aaKnown RBP5.15□□□□□ -1.58
SLIRP-202ENST00000553981 CPS1P31327 1500 aa5.15□□□□□ -1.58
SLIRP-202ENST00000553981 KIAA1324LA8MWY0 1029 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 DDX3YO15523 660 aaKnown RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 COBLO75128 1261 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 ATG7O95352 703 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 EPHA1P21709 976 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 UVSSAQ2YD98 709 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 ZDHHC13Q8IUH4 622 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 KLHL23Q8NBE8 558 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 FOXD4L4Q8WXT5 416 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 UTP4Q969X6 686 aaKnown RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 FAM46AQ96IP4 442 aaKnown RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 PBX4Q9BYU1 374 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 SH2B1Q9NRF2 756 aaPredicted RBP5.15□□□□□ -1.59
SLIRP-202ENST00000553981 DEPDC5O75140 1603 aa5.15□□□□□ -1.59
SLIRP-202ENST00000553981 CEP162Q5TB80 1403 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 CAMSAP2Q08AD1 1489 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 ABCC3O15438 1527 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 KDM5DQ9BY66 1539 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 UGGT1Q9NYU2 1555 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 ADAM11O75078 769 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 NFIAQ12857 509 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 DUOXA2Q1HG44 320 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 FAM117BQ6P1L5 589 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 NCAPG2Q86XI2 1143 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 TRIM42Q8IWZ5 723 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 ABTB2Q8N961 1025 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 UBASH3BQ8TF42 649 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 CLP1Q92989 425 aaKnown RBP5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms