RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 CCDC158Q5M9N0 1113 aa28.58■■■□□ 2.17
NEK9-203ENST00000553945 TTC39AQ5SRH9 613 aa28.58■■■□□ 2.17
NEK9-203ENST00000553945 TEKT1Q969V4 418 aa28.58■■■□□ 2.17
NEK9-203ENST00000553945 KIF1BPQ96EK5 621 aa28.58■■■□□ 2.17
NEK9-203ENST00000553945 ABT1Q9ULW3 272 aaKnown RBP28.58■■■□□ 2.17
NEK9-203ENST00000553945 SALL1Q9NSC2 1324 aa28.58■■■□□ 2.17
NEK9-203ENST00000553945 CLRN2A0PK11 232 aa28.57■■■□□ 2.16
NEK9-203ENST00000553945 RAB11FIP3O75154 756 aa28.57■■■□□ 2.16
NEK9-203ENST00000553945 LDHBP07195 334 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 ARID4AP29374 1257 aaPredicted RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 HDLBPQ00341 1268 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 APOBEC3FQ8IUX4 373 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 CDCA5Q96FF9 252 aa28.57■■■□□ 2.16
NEK9-203ENST00000553945 TLR7Q9NYK1 1049 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 HMG20BQ9P0W2 317 aa28.57■■■□□ 2.16
NEK9-203ENST00000553945 DBNLQ9UJU6 430 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 SUPT16HQ9Y5B9 1047 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 PDS5AQ29RF7 1337 aaKnown RBP28.57■■■□□ 2.16
NEK9-203ENST00000553945 PRDX5P30044 214 aa28.56■■■□□ 2.16
NEK9-203ENST00000553945 AOX1Q06278 1338 aa28.56■■■□□ 2.16
NEK9-203ENST00000553945 AACSQ86V21 672 aa28.56■■■□□ 2.16
NEK9-203ENST00000553945 ZGPATQ8N5A5 531 aaKnown RBP28.56■■■□□ 2.16
NEK9-203ENST00000553945 SPATA5Q8NB90 893 aa28.56■■■□□ 2.16
NEK9-203ENST00000553945 BCL11AQ9H165 835 aa28.56■■■□□ 2.16
NEK9-203ENST00000553945 PI16Q6UXB8 463 aa28.55■■■□□ 2.16
NEK9-203ENST00000553945 VEZTQ9HBM0 779 aa28.55■■■□□ 2.16
NEK9-203ENST00000553945 ABCF2Q9UG63 623 aa28.55■■■□□ 2.16
NEK9-203ENST00000553945 MKRN1Q9UHC7 482 aaKnown RBP28.55■■■□□ 2.16
NEK9-203ENST00000553945 PCDHB15Q9Y5E8 787 aa28.55■■■□□ 2.16
NEK9-203ENST00000553945 CLASRPQ8N2M8 674 aaKnown RBP28.54■■■□□ 2.16
NEK9-203ENST00000553945 KLRG1Q96E93 195 aa28.54■■■□□ 2.16
NEK9-203ENST00000553945 MRIQ9BWK5 157 aa28.54■■■□□ 2.16
NEK9-203ENST00000553945 TDRD3Q9H7E2 651 aaKnown RBP28.54■■■□□ 2.16
NEK9-203ENST00000553945 MCAMP43121 646 aa28.53■■■□□ 2.16
NEK9-203ENST00000553945 PRAMEF18Q5VWM3 479 aa28.53■■■□□ 2.16
NEK9-203ENST00000553945 SPTY2D1Q68D10 685 aaPredicted RBP28.52■■■□□ 2.16
NEK9-203ENST00000553945 HHIPL2Q6UWX4 724 aa28.52■■■□□ 2.16
NEK9-203ENST00000553945 ZDHHC15Q96MV8 337 aa28.52■■■□□ 2.16
NEK9-203ENST00000553945 SNRKQ9NRH2 765 aa28.52■■■□□ 2.16
NEK9-203ENST00000553945 ZNF70Q9UC06 446 aaPredicted RBP28.52■■■□□ 2.16
NEK9-203ENST00000553945 CNTNAP1P78357 1384 aa28.51■■■□□ 2.16
NEK9-203ENST00000553945 DIXDC1Q155Q3 683 aa28.51■■■□□ 2.15
NEK9-203ENST00000553945 SPDYE2Q495Y8 402 aa28.51■■■□□ 2.15
NEK9-203ENST00000553945 DZIP1Q86YF9 867 aaKnown RBP28.51■■■□□ 2.15
NEK9-203ENST00000553945 TLL2Q9Y6L7 1015 aa28.51■■■□□ 2.15
NEK9-203ENST00000553945 DEFB115Q30KQ5 88 aa28.5■■■□□ 2.15
NEK9-203ENST00000553945 TBC1D9Q6ZT07 1266 aa28.5■■■□□ 2.15
NEK9-203ENST00000553945 ZNF512BQ96KM6 892 aaPredicted RBP28.5■■■□□ 2.15
NEK9-203ENST00000553945 DEFB129Q9H1M3 183 aa28.5■■■□□ 2.15
NEK9-203ENST00000553945 RASSF10A6NK89 507 aa28.49■■■□□ 2.15
NEK9-203ENST00000553945 IFIT2P09913 472 aaKnown RBP28.49■■■□□ 2.15
NEK9-203ENST00000553945 ERICH6Q7L0X2 663 aa28.49■■■□□ 2.15
NEK9-203ENST00000553945 C2orf69Q8N8R5 385 aa28.49■■■□□ 2.15
NEK9-203ENST00000553945 GBA2Q9HCG7 927 aaPredicted RBP28.49■■■□□ 2.15
NEK9-203ENST00000553945 APOBEC3HQ6NTF7 200 aaKnown RBP28.48■■■□□ 2.15
NEK9-203ENST00000553945 SAPCD2Q86UD0 394 aa28.48■■■□□ 2.15
NEK9-203ENST00000553945 LRRCC1Q9C099 1032 aa28.48■■■□□ 2.15
NEK9-203ENST00000553945 DCTPP1Q9H773 170 aa28.48■■■□□ 2.15
NEK9-203ENST00000553945 DAGLAQ9Y4D2 1042 aa28.48■■■□□ 2.15
NEK9-203ENST00000553945 AKAP11Q9UKA4 1901 aa28.47■■■□□ 2.15
NEK9-203ENST00000553945 PAXIP1Q6ZW49 1069 aaPredicted RBP28.47■■■□□ 2.15
NEK9-203ENST00000553945 MYH2Q9UKX2 1941 aa28.46■■■□□ 2.15
NEK9-203ENST00000553945 TCP10L2B9ZVM9 353 aa28.46■■■□□ 2.15
NEK9-203ENST00000553945 SMARCA5O60264 1052 aaPredicted RBP28.46■■■□□ 2.15
NEK9-203ENST00000553945 NF2P35240 595 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 ZAP70P43403 619 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 HUNKP57058 714 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 MECOMQ03112 1051 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 TNFAIP1Q13829 316 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 RASA3Q14644 834 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 SLF2Q8IX21 1173 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 EXOC6Q8TAG9 804 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 TMOD2Q9NZR1 351 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 RAI14Q9P0K7 980 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 LRP2BPQ9P2M1 347 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 PPP2R3BQ9Y5P8 575 aa28.45■■■□□ 2.14
NEK9-203ENST00000553945 VEGFBP49765 207 aa28.44■■■□□ 2.14
NEK9-203ENST00000553945 CACNB3P54284 484 aa28.44■■■□□ 2.14
NEK9-203ENST00000553945 CYP2E1P05181 493 aaPredicted RBP28.43■■■□□ 2.14
NEK9-203ENST00000553945 AAMPQ13685 434 aa28.43■■■□□ 2.14
NEK9-203ENST00000553945 PAPPA2Q9BXP8 1791 aa28.42■■■□□ 2.14
NEK9-203ENST00000553945 TNNI2P48788 182 aa28.42■■■□□ 2.14
NEK9-203ENST00000553945 GRM1Q13255 1194 aa28.42■■■□□ 2.14
NEK9-203ENST00000553945 TTLL12Q14166 644 aaPredicted RBP28.42■■■□□ 2.14
NEK9-203ENST00000553945 CYP4F22Q6NT55 531 aa28.42■■■□□ 2.14
NEK9-203ENST00000553945 GSTO1P78417 241 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 CDC42EP5Q6NZY7 148 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 CAPNS2Q96L46 248 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 USP40Q9NVE5 1235 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 NDUFB9Q9Y6M9 179 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 PCNTO95613 3336 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 MROH7-TTC4A0A0A0MT08 1334 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 GAKO14976 1311 aa28.41■■■□□ 2.14
NEK9-203ENST00000553945 ECE1P42892 770 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 FKBP1BP68106 108 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 PRKG1Q13976 671 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 MOB2Q70IA6 237 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 JMYQ8N9B5 988 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 ZNF384Q8TF68 577 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 NSUN4Q96CB9 384 aaKnown RBP28.4■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 163.2 ms