RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DPF2Q92785 391 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 REPIN1Q9BWE0 567 aaKnown RBP10.34□□□□□ -0.75
PSEN1-209ENST00000553855 ZSWIM6Q9HCJ5 1215 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 ADARB2Q9NS39 739 aaKnown RBP10.34□□□□□ -0.75
PSEN1-209ENST00000553855 CEP126Q9P2H0 1117 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 TAF1P21675 1872 aa10.34□□□□□ -0.75
PSEN1-209ENST00000553855 MYO3BQ8WXR4 1341 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 WDR90Q96KV7 1748 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 YDJCA8MPS7 323 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 IL15P40933 162 aaPredicted RBP10.33□□□□□ -0.76
PSEN1-209ENST00000553855 G3BP1Q13283 466 aaKnown RBP eCLIP10.33□□□□□ -0.76
PSEN1-209ENST00000553855 OGFOD1Q8N543 542 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 AGBL3Q8NEM8 1001 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 TMUB1Q9BVT8 246 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 PUS3Q9BZE2 481 aaKnown RBP10.33□□□□□ -0.76
PSEN1-209ENST00000553855 SIL1Q9H173 461 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 GPRC5DQ9NZD1 345 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 CNOT7Q9UIV1 285 aaKnown RBP10.33□□□□□ -0.76
PSEN1-209ENST00000553855 HDAC9Q9UKV0 1011 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 DDX19BQ9UMR2 479 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 TNNQ9UQP3 1299 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 RIPOR2Q9Y4F9 1068 aa10.33□□□□□ -0.76
PSEN1-209ENST00000553855 DUOX1Q9NRD9 1551 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 POTECB2RU33 542 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 CIAO1O76071 339 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 PDE8BO95263 885 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 VIL1P09327 827 aaKnown RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 SLC5A1P13866 664 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 HIBADHP31937 336 aaKnown RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 EPS15P42566 896 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 MMP14P50281 582 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 SCNN1DP51172 638 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 OS9Q13438 667 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 PUM3Q15397 648 aaKnown RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 LRRC24Q50LG9 513 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 STRIP1Q5VSL9 837 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 TTLL5Q6EMB2 1281 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 C15orf52Q6ZUT6 534 aaKnown RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 KLHDC4Q8TBB5 520 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 PANK1Q8TE04 598 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
PSEN1-209ENST00000553855 CD209Q9NNX6 404 aa10.32□□□□□ -0.76
PSEN1-209ENST00000553855 HSPA6P17066 643 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 CLCN1P35523 988 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 APLP1P51693 650 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 EMP3P54852 163 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 GTF2IP78347 998 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 MTX1Q13505 466 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 MVPQ14764 893 aaKnown RBP10.31□□□□□ -0.76
PSEN1-209ENST00000553855 LPIN2Q92539 896 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 MARVELD3Q96A59 401 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 COPRSQ9NQ92 184 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 GNL3LQ9NVN8 582 aaKnown RBP10.31□□□□□ -0.76
PSEN1-209ENST00000553855 AKAP2Q9Y2D5 859 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 COL4A1P02462 1669 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 COL4A5P29400 1685 aa10.31□□□□□ -0.76
PSEN1-209ENST00000553855 POTEMA6NI47 508 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 HMMRO75330 724 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 USP17L8P0C7I0 530 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 RFX5P48382 616 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-209ENST00000553855 PDE3AQ14432 1141 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 ARSIQ5FYB1 569 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 LCE2DQ5TA82 110 aaPredicted RBP10.3□□□□□ -0.76
PSEN1-209ENST00000553855 TYW1BQ6NUM6 668 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 POTEGQ6S5H5 508 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 TXNRD3Q86VQ6 643 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 GPCPD1Q9NPB8 672 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 KCNQ5Q9NR82 932 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 PCDH10Q9P2E7 1040 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 COG6Q9Y2V7 657 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 PCDHGA10Q9Y5H3 936 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 SCN4AP35499 1836 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 SPEF2Q9C093 1822 aa10.3□□□□□ -0.76
PSEN1-209ENST00000553855 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-209ENST00000553855 RLBP1P12271 317 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 HOXB1P14653 301 aaPredicted RBP10.29□□□□□ -0.76
PSEN1-209ENST00000553855 IL1R1P14778 569 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 KLRK1P26718 216 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 GYG1P46976 350 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 ATP8B2P98198 1209 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 ATP2B3Q16720 1220 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 KIF4BQ2VIQ3 1234 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 GORABQ5T7V8 394 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 DCPSQ96C86 337 aaKnown RBP10.29□□□□□ -0.76
PSEN1-209ENST00000553855 C1orf115Q9H7X2 142 aa10.29□□□□□ -0.76
PSEN1-209ENST00000553855 PA2G4Q9UQ80 394 aaKnown RBP10.29□□□□□ -0.76
PSEN1-209ENST00000553855 LTBP1Q14766 1721 aa10.28□□□□□ -0.76
PSEN1-209ENST00000553855 WTIPA6NIX2 430 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-209ENST00000553855 SNAP23O00161 211 aa10.28□□□□□ -0.76
PSEN1-209ENST00000553855 SURF6O75683 361 aaKnown RBP10.28□□□□□ -0.76
PSEN1-209ENST00000553855 SASH1O94885 1247 aa10.28□□□□□ -0.76
PSEN1-209ENST00000553855 MDM2Q00987 491 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-209ENST00000553855 TSR1Q2NL82 804 aaKnown RBP10.28□□□□□ -0.76
PSEN1-209ENST00000553855 TBC1D10BQ4KMP7 808 aaPredicted RBP10.28□□□□□ -0.76
PSEN1-209ENST00000553855 HSP90AB4PQ58FF6 505 aa10.28□□□□□ -0.76
PSEN1-209ENST00000553855 SH3D19Q5HYK7 790 aa10.28□□□□□ -0.76
PSEN1-209ENST00000553855 TBC1D22AQ8WUA7 517 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms