RNA–Protein interactions for RNA: ENST00000553744.1

TMEM253-202, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 195 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-202ENST00000553744 CRKP46108 304 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 HDLBPQ00341 1268 aaKnown RBP14.58□□□□□ -0.08
TMEM253-202ENST00000553744 CCDC158Q5M9N0 1113 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 TTC39AQ5SRH9 613 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 USP48Q86UV5 1035 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 AACSQ86V21 672 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 SULF1Q8IWU6 871 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 CLASRPQ8N2M8 674 aaKnown RBP14.58□□□□□ -0.08
TMEM253-202ENST00000553744 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
TMEM253-202ENST00000553744 HMG20BQ9P0W2 317 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 PCDHAC2Q9Y5I4 1007 aa14.58□□□□□ -0.08
TMEM253-202ENST00000553744 ADM5C9JUS6 153 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 RBM5P52756 815 aaKnown RBP eCLIP14.57□□□□□ -0.08
TMEM253-202ENST00000553744 FMR1Q06787 632 aaKnown RBP eCLIP14.57□□□□□ -0.08
TMEM253-202ENST00000553744 PI16Q6UXB8 463 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 SPATA5Q8NB90 893 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 EXOC6Q8TAG9 804 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 ZNF512BQ96KM6 892 aaPredicted RBP14.57□□□□□ -0.08
TMEM253-202ENST00000553744 DCTPP1Q9H773 170 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 CREBZFQ9NS37 354 aa14.57□□□□□ -0.08
TMEM253-202ENST00000553744 MYO1BO43795 1136 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 SLC34A2O95436 690 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 LDHBP07195 334 aaKnown RBP14.56□□□□□ -0.08
TMEM253-202ENST00000553744 HSPA1AP0DMV8 641 aaKnown RBP14.56□□□□□ -0.08
TMEM253-202ENST00000553744 HSPA1BP0DMV9 641 aaKnown RBP14.56□□□□□ -0.08
TMEM253-202ENST00000553744 TEKT1Q969V4 418 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 PRMT6Q96LA8 375 aaPredicted RBP14.56□□□□□ -0.08
TMEM253-202ENST00000553744 MRIQ9BWK5 157 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 LRRCC1Q9C099 1032 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 ECM29Q5VYK3 1845 aa14.56□□□□□ -0.08
TMEM253-202ENST00000553744 TMEM88BA6NKF7 163 aa14.55□□□□□ -0.08
TMEM253-202ENST00000553744 IFIT2P09913 472 aaKnown RBP14.55□□□□□ -0.08
TMEM253-202ENST00000553744 APOBEC3FQ8IUX4 373 aaKnown RBP14.55□□□□□ -0.08
TMEM253-202ENST00000553744 ABCF2Q9UG63 623 aa14.55□□□□□ -0.08
TMEM253-202ENST00000553744 AOX1Q06278 1338 aa14.55□□□□□ -0.08
TMEM253-202ENST00000553744 TRPM7Q96QT4 1865 aa14.55□□□□□ -0.08
TMEM253-202ENST00000553744 CLRN2A0PK11 232 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 CELF2O95319 508 aaKnown RBP14.54□□□□□ -0.08
TMEM253-202ENST00000553744 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 CST9Q5W186 159 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 SPTY2D1Q68D10 685 aaPredicted RBP14.54□□□□□ -0.08
TMEM253-202ENST00000553744 HHIPL2Q6UWX4 724 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 DLK2Q6UY11 383 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 ZDHHC15Q96MV8 337 aa14.54□□□□□ -0.08
TMEM253-202ENST00000553744 SCAF8Q9UPN6 1271 aaKnown RBP14.54□□□□□ -0.08
TMEM253-202ENST00000553744 AKAP11Q9UKA4 1901 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 SMARCA5O60264 1052 aaPredicted RBP14.53□□□□□ -0.08
TMEM253-202ENST00000553744 HDAC1Q13547 482 aaPredicted RBP14.53□□□□□ -0.08
TMEM253-202ENST00000553744 DIXDC1Q155Q3 683 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 DZIP1Q86YF9 867 aaKnown RBP14.53□□□□□ -0.08
TMEM253-202ENST00000553744 CDCA5Q96FF9 252 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 ZNF408Q9H9D4 720 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 VEZTQ9HBM0 779 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 SNRKQ9NRH2 765 aa14.53□□□□□ -0.08
TMEM253-202ENST00000553744 CYP2E1P05181 493 aaPredicted RBP14.52□□□□□ -0.09
TMEM253-202ENST00000553744 ZAP70P43403 619 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 APOBEC3HQ6NTF7 200 aaKnown RBP14.52□□□□□ -0.09
TMEM253-202ENST00000553744 TBC1D9Q6ZT07 1266 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 ERICH6Q7L0X2 663 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 BCL11AQ9H165 835 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 TDRD3Q9H7E2 651 aaKnown RBP14.52□□□□□ -0.09
TMEM253-202ENST00000553744 ZNF70Q9UC06 446 aaPredicted RBP14.52□□□□□ -0.09
TMEM253-202ENST00000553744 DAGLAQ9Y4D2 1042 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 POLR2AP24928 1970 aaKnown RBP14.52□□□□□ -0.09
TMEM253-202ENST00000553744 MAST2Q6P0Q8 1798 aa14.52□□□□□ -0.09
TMEM253-202ENST00000553744 GAKO14976 1311 aa14.51□□□□□ -0.09
TMEM253-202ENST00000553744 IRX6P78412 446 aaPredicted RBP14.51□□□□□ -0.09
TMEM253-202ENST00000553744 MECOMQ03112 1051 aa14.51□□□□□ -0.09
TMEM253-202ENST00000553744 SLF2Q8IX21 1173 aa14.51□□□□□ -0.09
TMEM253-202ENST00000553744 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.51□□□□□ -0.09
TMEM253-202ENST00000553744 PPP2R3BQ9Y5P8 575 aa14.51□□□□□ -0.09
TMEM253-202ENST00000553744 MROH7-TTC4A0A0A0MT08 1334 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 TNFAIP1Q13829 316 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 ZNF384Q8TF68 577 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 NSUN4Q96CB9 384 aaKnown RBP14.5□□□□□ -0.09
TMEM253-202ENST00000553744 GCC1Q96CN9 775 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 DEFB129Q9H1M3 183 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 RAI14Q9P0K7 980 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 LRP2BPQ9P2M1 347 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 ABT1Q9ULW3 272 aaKnown RBP14.5□□□□□ -0.09
TMEM253-202ENST00000553744 TLL2Q9Y6L7 1015 aa14.5□□□□□ -0.09
TMEM253-202ENST00000553744 CNTNAP1P78357 1384 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 RASSF10A6NK89 507 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 IGSF3O75054 1194 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 GSTO1P78417 241 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 PRAMEF18Q5VWM3 479 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
TMEM253-202ENST00000553744 GBA2Q9HCG7 927 aaPredicted RBP14.49□□□□□ -0.09
TMEM253-202ENST00000553744 PIH1D3Q9NQM4 214 aaKnown RBP14.49□□□□□ -0.09
TMEM253-202ENST00000553744 TMOD2Q9NZR1 351 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 NDUFB9Q9Y6M9 179 aa14.49□□□□□ -0.09
TMEM253-202ENST00000553744 PAPPA2Q9BXP8 1791 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 TCP10L2B9ZVM9 353 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 ATP5JP18859 108 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 CACNB3P54284 484 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 RASA3Q14644 834 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 FKBP1CQ5VVH2 108 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 SAPCD2Q86UD0 394 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 C2orf69Q8N8R5 385 aa14.48□□□□□ -0.09
TMEM253-202ENST00000553744 RWDD1Q9H446 243 aaPredicted RBP14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms