RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 CYP11A1P05108 521 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 CTSBP07858 339 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 NUTM2GQ5VZR2 741 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 FDX2Q6P4F2 183 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 TRIM56Q9BRZ2 755 aaKnown RBP11.8□□□□□ -0.52
PCNX1-205ENST00000553508 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 SPG7Q9UQ90 795 aa11.8□□□□□ -0.52
PCNX1-205ENST00000553508 RPS26P11Q5JNZ5 115 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-205ENST00000553508 C12orf50Q8NA57 414 aaPredicted RBP11.79□□□□□ -0.52
PCNX1-205ENST00000553508 CORO1BQ9BR76 489 aa11.79□□□□□ -0.52
PCNX1-205ENST00000553508 NRSN2Q9GZP1 204 aa11.79□□□□□ -0.52
PCNX1-205ENST00000553508 XRCC5P13010 732 aaKnown RBP11.78□□□□□ -0.52
PCNX1-205ENST00000553508 EXOSC6Q5RKV6 272 aaKnown RBP11.78□□□□□ -0.52
PCNX1-205ENST00000553508 NPAS4Q8IUM7 802 aa11.78□□□□□ -0.52
PCNX1-205ENST00000553508 UTP4Q969X6 686 aaKnown RBP11.78□□□□□ -0.52
PCNX1-205ENST00000553508 TMPRSS13Q9BYE2 586 aa11.78□□□□□ -0.52
PCNX1-205ENST00000553508 ZC3H12CQ9C0D7 883 aaKnown RBP11.78□□□□□ -0.52
PCNX1-205ENST00000553508 MEGF11A6BM72 1044 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 EIF4EBP3O60516 100 aaPredicted RBP11.77□□□□□ -0.53
PCNX1-205ENST00000553508 H2AFB1P0C5Y9 115 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 H2AFB2P0C5Z0 115 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 PREPP48147 710 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 ANKRD34AQ69YU3 496 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 ARMC10Q8N2F6 343 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 ZFYVE1Q9HBF4 777 aa11.77□□□□□ -0.53
PCNX1-205ENST00000553508 PRPF40AO75400 957 aaKnown RBP11.76□□□□□ -0.53
PCNX1-205ENST00000553508 DRD2P14416 443 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 GSTT1P30711 240 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 TPTE2Q6XPS3 522 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 C3orf58Q8NDZ4 430 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 DUSP9Q99956 384 aaKnown RBP11.76□□□□□ -0.53
PCNX1-205ENST00000553508 C12orf49Q9H741 205 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 CYP4F12Q9HCS2 524 aa11.76□□□□□ -0.53
PCNX1-205ENST00000553508 FBXO24O75426 580 aa11.75□□□□□ -0.53
PCNX1-205ENST00000553508 PDE3AQ14432 1141 aa11.75□□□□□ -0.53
PCNX1-205ENST00000553508 FAM46AQ96IP4 442 aaKnown RBP11.75□□□□□ -0.53
PCNX1-205ENST00000553508 RAD18Q9NS91 495 aa11.75□□□□□ -0.53
PCNX1-205ENST00000553508 TMEM39AQ9NV64 488 aa11.75□□□□□ -0.53
PCNX1-205ENST00000553508 GIPC1O14908 333 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 GAS2O43903 313 aaKnown RBP11.74□□□□□ -0.53
PCNX1-205ENST00000553508 ITGB7P26010 798 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 PPP2R3AQ06190 1150 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 AP3B2Q13367 1082 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 SRCIN1Q9C0H9 1055 aa11.74□□□□□ -0.53
PCNX1-205ENST00000553508 DHX15O43143 795 aaKnown RBP11.73□□□□□ -0.53
PCNX1-205ENST00000553508 USP17L7P0C7H9 530 aa11.73□□□□□ -0.53
PCNX1-205ENST00000553508 AKAP4Q5JQC9 854 aa11.73□□□□□ -0.53
PCNX1-205ENST00000553508 PRSS36Q5K4E3 855 aa11.73□□□□□ -0.53
PCNX1-205ENST00000553508 KCNF1Q9H3M0 494 aa11.73□□□□□ -0.53
PCNX1-205ENST00000553508 BMP3P12645 472 aa11.72□□□□□ -0.53
PCNX1-205ENST00000553508 GNA15P30679 374 aa11.72□□□□□ -0.53
PCNX1-205ENST00000553508 SMG8Q8ND04 991 aaKnown RBP11.72□□□□□ -0.53
PCNX1-205ENST00000553508 FAM8A1Q9UBU6 413 aa11.72□□□□□ -0.53
PCNX1-205ENST00000553508 RAXQ9Y2V3 346 aa11.72□□□□□ -0.53
PCNX1-205ENST00000553508 EIF4BP23588 611 aaKnown RBP11.71□□□□□ -0.53
PCNX1-205ENST00000553508 TAGLNQ01995 201 aaKnown RBP11.71□□□□□ -0.53
PCNX1-205ENST00000553508 UVSSAQ2YD98 709 aa11.71□□□□□ -0.53
PCNX1-205ENST00000553508 MYRFLQ96LU7 910 aa11.71□□□□□ -0.53
PCNX1-205ENST00000553508 SUGCTQ9HAC7 445 aa11.71□□□□□ -0.53
PCNX1-205ENST00000553508 STOML1Q9UBI4 398 aa11.71□□□□□ -0.53
PCNX1-205ENST00000553508 PARP2Q9UGN5 583 aa11.71□□□□□ -0.53
PCNX1-205ENST00000553508 LIG1P18858 919 aa11.7□□□□□ -0.54
PCNX1-205ENST00000553508 FGD1P98174 961 aa11.7□□□□□ -0.54
PCNX1-205ENST00000553508 STK35Q8TDR2 534 aa11.7□□□□□ -0.54
PCNX1-205ENST00000553508 KCNB2Q92953 911 aa11.7□□□□□ -0.54
PCNX1-205ENST00000553508 FRMD6Q96NE9 622 aa11.7□□□□□ -0.54
PCNX1-205ENST00000553508 RXRBP28702 533 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 SOX4Q06945 474 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-205ENST00000553508 HP1BP3Q5SSJ5 553 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-205ENST00000553508 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.69□□□□□ -0.54
PCNX1-205ENST00000553508 SULF2Q8IWU5 870 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 FAM20CQ8IXL6 584 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 FAM161BQ96MY7 647 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 CCDC86Q9H6F5 360 aaKnown RBP11.69□□□□□ -0.54
PCNX1-205ENST00000553508 CBX8Q9HC52 389 aa11.69□□□□□ -0.54
PCNX1-205ENST00000553508 TIAF1O95411 115 aa11.68□□□□□ -0.54
PCNX1-205ENST00000553508 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
PCNX1-205ENST00000553508 USP11P51784 963 aa11.68□□□□□ -0.54
PCNX1-205ENST00000553508 XPCQ01831 940 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-205ENST00000553508 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
PCNX1-205ENST00000553508 WDR89Q96FK6 387 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-205ENST00000553508 NECAB3Q96P71 396 aaPredicted RBP11.68□□□□□ -0.54
PCNX1-205ENST00000553508 TTF2Q9UNY4 1162 aaKnown RBP11.68□□□□□ -0.54
PCNX1-205ENST00000553508 AP4E1Q9UPM8 1137 aa11.68□□□□□ -0.54
PCNX1-205ENST00000553508 AK5Q9Y6K8 562 aa11.68□□□□□ -0.54
PCNX1-205ENST00000553508 AOC2O75106 756 aa11.67□□□□□ -0.54
PCNX1-205ENST00000553508 ADH5P11766 374 aa11.67□□□□□ -0.54
PCNX1-205ENST00000553508 PSMD2Q13200 908 aa11.67□□□□□ -0.54
PCNX1-205ENST00000553508 DYMQ7RTS9 669 aa11.67□□□□□ -0.54
PCNX1-205ENST00000553508 TRIM42Q8IWZ5 723 aa11.67□□□□□ -0.54
PCNX1-205ENST00000553508 HMX2A2RU54 273 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 PAGE1O75459 146 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 ARNTP27540 789 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 FBXO33Q7Z6M2 555 aa11.66□□□□□ -0.54
PCNX1-205ENST00000553508 C2CD4AQ8NCU7 369 aaPredicted RBP11.66□□□□□ -0.54
PCNX1-205ENST00000553508 WDR18Q9BV38 432 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms