RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 PRPF40AO75400 957 aaKnown RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 HSPD1P10809 573 aaKnown RBP18.19■□□□□ 0.5
ABCD4-218ENST00000553486 SCARF1Q14162 830 aa18.19■□□□□ 0.5
ABCD4-218ENST00000553486 LAMA4Q16363 1823 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 SLC5A1P13866 664 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 NPR1P16066 1061 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
ABCD4-218ENST00000553486 MCAMP43121 646 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 WASHC4Q2M389 1173 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 SLFNL1Q499Z3 407 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 APPBP2Q92624 585 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 KLRG1Q96E93 195 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 SLX4Q8IY92 1834 aa18.18■□□□□ 0.5
ABCD4-218ENST00000553486 POTECB2RU33 542 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 M0R2C6 588 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 STX6O43752 255 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 SYT1P21579 422 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 FGFR2P21802 821 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 GJB2P29033 226 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 TOB2Q14106 344 aaPredicted RBP18.17■□□□□ 0.5
ABCD4-218ENST00000553486 C7orf43Q8WVR3 580 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 OSBP2Q969R2 916 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 CTNNA3Q9UI47 895 aa18.17■□□□□ 0.5
ABCD4-218ENST00000553486 ZSCAN22P10073 491 aaPredicted RBP18.16■□□□□ 0.5
ABCD4-218ENST00000553486 ARID4AP29374 1257 aaPredicted RBP18.16■□□□□ 0.5
ABCD4-218ENST00000553486 CCDC102BQ68D86 513 aa18.16■□□□□ 0.5
ABCD4-218ENST00000553486 TCEANC2Q96MN5 208 aa18.16■□□□□ 0.5
ABCD4-218ENST00000553486 SEC31BQ9NQW1 1179 aa18.16■□□□□ 0.5
ABCD4-218ENST00000553486 ATP6V1DQ9Y5K8 247 aa18.16■□□□□ 0.5
ABCD4-218ENST00000553486 CCDC88AQ3V6T2 1871 aa18.16■□□□□ 0.5
ABCD4-218ENST00000553486 NCLP19338 710 aaKnown RBP18.15■□□□□ 0.5
ABCD4-218ENST00000553486 NECAB1Q8N987 351 aa18.15■□□□□ 0.5
ABCD4-218ENST00000553486 TCHHQ07283 1943 aa18.14■□□□□ 0.5
ABCD4-218ENST00000553486 MRE11P49959 708 aa18.14■□□□□ 0.5
ABCD4-218ENST00000553486 ST3GAL1Q11201 340 aa18.14■□□□□ 0.5
ABCD4-218ENST00000553486 CCDC93Q567U6 631 aa18.14■□□□□ 0.5
ABCD4-218ENST00000553486 Q6ZUG5 572 aa18.14■□□□□ 0.5
ABCD4-218ENST00000553486 DHX32Q7L7V1 743 aaKnown RBP18.14■□□□□ 0.5
ABCD4-218ENST00000553486 HELBQ8NG08 1087 aaPredicted RBP18.14■□□□□ 0.5
ABCD4-218ENST00000553486 CDC5LQ99459 802 aaKnown RBP18.14■□□□□ 0.5
ABCD4-218ENST00000553486 MBD3O95983 291 aa18.14■□□□□ 0.49
ABCD4-218ENST00000553486 PHKA1P46020 1223 aa18.14■□□□□ 0.49
ABCD4-218ENST00000553486 COL9A3Q14050 684 aaPredicted RBP18.14■□□□□ 0.49
ABCD4-218ENST00000553486 PI16Q6UXB8 463 aa18.14■□□□□ 0.49
ABCD4-218ENST00000553486 JMYQ8N9B5 988 aa18.14■□□□□ 0.49
ABCD4-218ENST00000553486 PDCP20941 246 aa18.13■□□□□ 0.49
ABCD4-218ENST00000553486 GTF2E1P29083 439 aaPredicted RBP18.13■□□□□ 0.49
ABCD4-218ENST00000553486 ADD2P35612 726 aa18.13■□□□□ 0.49
ABCD4-218ENST00000553486 FGD1P98174 961 aa18.13■□□□□ 0.49
ABCD4-218ENST00000553486 STOX1Q6ZVD7 989 aa18.13■□□□□ 0.49
ABCD4-218ENST00000553486 DICER1Q9UPY3 1922 aaKnown RBP18.13■□□□□ 0.49
ABCD4-218ENST00000553486 MYO5AQ9Y4I1 1855 aaKnown RBP18.12■□□□□ 0.49
ABCD4-218ENST00000553486 E7EWF7 191 aa18.12■□□□□ 0.49
ABCD4-218ENST00000553486 DDNO94850 711 aaPredicted RBP18.12■□□□□ 0.49
ABCD4-218ENST00000553486 F13A1P00488 732 aa18.12■□□□□ 0.49
ABCD4-218ENST00000553486 UBE3CQ15386 1083 aa18.12■□□□□ 0.49
ABCD4-218ENST00000553486 NYXQ9GZU5 481 aa18.12■□□□□ 0.49
ABCD4-218ENST00000553486 SF3B3Q15393 1217 aaKnown RBP18.12■□□□□ 0.49
ABCD4-218ENST00000553486 IMMTQ16891 758 aaKnown RBP18.12■□□□□ 0.49
ABCD4-218ENST00000553486 PUS7LQ9H0K6 701 aaKnown RBP18.12■□□□□ 0.49
ABCD4-218ENST00000553486 CACNA1SQ13698 1873 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 GPAA1O43292 621 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 ALDH1B1P30837 517 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 CRY2Q49AN0 593 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 SLC9C2Q5TAH2 1124 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 OLFM4Q6UX06 510 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 GPT2Q8TD30 523 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 CHAMP1Q96JM3 812 aa18.11■□□□□ 0.49
ABCD4-218ENST00000553486 XRCC6P12956 609 aaKnown RBP eCLIP18.1■□□□□ 0.49
ABCD4-218ENST00000553486 EXOSC10Q01780 885 aaKnown RBP18.1■□□□□ 0.49
ABCD4-218ENST00000553486 SLC10A5Q5PT55 438 aa18.1■□□□□ 0.49
ABCD4-218ENST00000553486 LARP1BQ659C4 914 aaKnown RBP18.1■□□□□ 0.49
ABCD4-218ENST00000553486 CAVIN1Q6NZI2 390 aaKnown RBP18.1■□□□□ 0.49
ABCD4-218ENST00000553486 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
ABCD4-218ENST00000553486 SPATA5Q8NB90 893 aa18.1■□□□□ 0.49
ABCD4-218ENST00000553486 GTF3C6Q969F1 213 aa18.1■□□□□ 0.49
ABCD4-218ENST00000553486 PIH1D3Q9NQM4 214 aaKnown RBP18.1■□□□□ 0.49
ABCD4-218ENST00000553486 MTMR6Q9Y217 621 aa18.1■□□□□ 0.49
ABCD4-218ENST00000553486 IDH1O75874 414 aaKnown RBP18.09■□□□□ 0.49
ABCD4-218ENST00000553486 STK3Q13188 491 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 ANKRD18AQ8IVF6 992 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 GRPEL1Q9HAV7 217 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 ZNF277Q9NRM2 450 aaPredicted RBP18.09■□□□□ 0.49
ABCD4-218ENST00000553486 DOCK2Q92608 1830 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 FGAP02671 866 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 CHRNDQ07001 517 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 TMEM87AQ8NBN3 555 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 BRF1Q92994 677 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 CHMP4CQ96CF2 233 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 AGXT2Q9BYV1 514 aa18.09■□□□□ 0.49
ABCD4-218ENST00000553486 ZNF445P59923 1031 aa18.08■□□□□ 0.48
ABCD4-218ENST00000553486 MAP3K12Q12852 859 aa18.08■□□□□ 0.48
ABCD4-218ENST00000553486 CSPP1Q1MSJ5 1256 aa18.08■□□□□ 0.48
ABCD4-218ENST00000553486 FOXD4L6Q3SYB3 417 aaPredicted RBP18.08■□□□□ 0.48
ABCD4-218ENST00000553486 TTLL5Q6EMB2 1281 aa18.08■□□□□ 0.48
ABCD4-218ENST00000553486 FOXD4L3Q6VB84 417 aaPredicted RBP18.08■□□□□ 0.48
ABCD4-218ENST00000553486 L3MBTL3Q96JM7 780 aaPredicted RBP18.08■□□□□ 0.48
ABCD4-218ENST00000553486 VPS37CA5D8V6 355 aaPredicted RBP18.07■□□□□ 0.48
ABCD4-218ENST00000553486 IQCA1LA6NCM1 817 aa18.07■□□□□ 0.48
ABCD4-218ENST00000553486 POTEIP0CG38 1075 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms