RNA–Protein interactions for RNA: ENST00000553317.1

CCDC175-203, Transcript of coiled-coil domain containing 175, humanhuman

TSL 3

Gene CCDC175, Length 326 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175-203ENST00000553317 RUSC1Q9BVN2 902 aa9.4□□□□□ -0.9
CCDC175-203ENST00000553317 ARID1BQ8NFD5 2236 aaPredicted RBP9.4□□□□□ -0.91
CCDC175-203ENST00000553317 EIF4EBP3O60516 100 aaPredicted RBP9.39□□□□□ -0.91
CCDC175-203ENST00000553317 PREPP48147 710 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 GSTM4Q03013 218 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 KIAA0319Q5VV43 1072 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 HGSNATQ68CP4 663 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 CCDC74AQ96AQ1 378 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 CSRNP1Q96S65 589 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 RNF208Q9H0X6 261 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 HIF3AQ9Y2N7 669 aa9.39□□□□□ -0.91
CCDC175-203ENST00000553317 MEGF11A6BM72 1044 aa9.38□□□□□ -0.91
CCDC175-203ENST00000553317 ESRRAP11474 423 aaPredicted RBP9.38□□□□□ -0.91
CCDC175-203ENST00000553317 ALKBH8Q96BT7 664 aaKnown RBP9.38□□□□□ -0.91
CCDC175-203ENST00000553317 TCF12Q99081 682 aa9.38□□□□□ -0.91
CCDC175-203ENST00000553317 USP26Q9BXU7 913 aa9.38□□□□□ -0.91
CCDC175-203ENST00000553317 SOX17Q9H6I2 414 aaPredicted RBP9.38□□□□□ -0.91
CCDC175-203ENST00000553317 PATL2C9JE40 543 aaKnown RBP9.37□□□□□ -0.91
CCDC175-203ENST00000553317 GRIA4P48058 902 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 PLCB3Q01970 1234 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 PCDH1Q08174 1060 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 SPRED3Q2MJR0 410 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 FDX2Q6P4F2 183 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 TMC7Q7Z402 723 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 TRAIPQ9BWF2 469 aa9.37□□□□□ -0.91
CCDC175-203ENST00000553317 CLEC4MQ9H2X3 399 aaPredicted RBP9.37□□□□□ -0.91
CCDC175-203ENST00000553317 BMP3P12645 472 aa9.36□□□□□ -0.91
CCDC175-203ENST00000553317 BEND4Q6ZU67 534 aa9.36□□□□□ -0.91
CCDC175-203ENST00000553317 SHKBP1Q8TBC3 707 aa9.36□□□□□ -0.91
CCDC175-203ENST00000553317 NLRP2Q9NX02 1062 aa9.36□□□□□ -0.91
CCDC175-203ENST00000553317 PPP4R2Q9NY27 417 aa9.36□□□□□ -0.91
CCDC175-203ENST00000553317 IGHA2P01877 340 aa9.35□□□□□ -0.91
CCDC175-203ENST00000553317 ZSCAN29Q8IWY8 852 aaPredicted RBP9.35□□□□□ -0.91
CCDC175-203ENST00000553317 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
CCDC175-203ENST00000553317 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
CCDC175-203ENST00000553317 NUTM2GQ5VZR2 741 aa9.34□□□□□ -0.91
CCDC175-203ENST00000553317 CYP4F12Q9HCS2 524 aa9.34□□□□□ -0.91
CCDC175-203ENST00000553317 ADGRE2Q9UHX3 823 aa9.34□□□□□ -0.91
CCDC175-203ENST00000553317 WNT11O96014 354 aa9.33□□□□□ -0.92
CCDC175-203ENST00000553317 YBX3P16989 372 aaKnown RBP eCLIP9.33□□□□□ -0.92
CCDC175-203ENST00000553317 C12orf50Q8NA57 414 aaPredicted RBP9.33□□□□□ -0.92
CCDC175-203ENST00000553317 GAS2O43903 313 aaKnown RBP9.32□□□□□ -0.92
CCDC175-203ENST00000553317 CYP11A1P05108 521 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 ZNF423Q2M1K9 1284 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 EPS8L3Q8TE67 593 aaKnown RBP9.32□□□□□ -0.92
CCDC175-203ENST00000553317 TMPRSS13Q9BYE2 586 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 KCNF1Q9H3M0 494 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 SUGCTQ9HAC7 445 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 ZFYVE1Q9HBF4 777 aa9.32□□□□□ -0.92
CCDC175-203ENST00000553317 LOC100289279A0A1B0GTE1 492 aa9.31□□□□□ -0.92
CCDC175-203ENST00000553317 PDIA4P13667 645 aaKnown RBP9.31□□□□□ -0.92
CCDC175-203ENST00000553317 EXOSC6Q5RKV6 272 aaKnown RBP9.31□□□□□ -0.92
CCDC175-203ENST00000553317 ZNF576Q9H609 170 aa9.31□□□□□ -0.92
CCDC175-203ENST00000553317 PNMA6FA0A0J9YX94 578 aa9.3□□□□□ -0.92
CCDC175-203ENST00000553317 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
CCDC175-203ENST00000553317 TIAF1O95411 115 aa9.3□□□□□ -0.92
CCDC175-203ENST00000553317 HOXA10P31260 410 aaPredicted RBP9.3□□□□□ -0.92
CCDC175-203ENST00000553317 HP1BP3Q5SSJ5 553 aaPredicted RBP9.3□□□□□ -0.92
CCDC175-203ENST00000553317 AEBP1Q8IUX7 1158 aa9.3□□□□□ -0.92
CCDC175-203ENST00000553317 SMG8Q8ND04 991 aaKnown RBP9.3□□□□□ -0.92
CCDC175-203ENST00000553317 RNF114Q9Y508 228 aa9.3□□□□□ -0.92
CCDC175-203ENST00000553317 TREHO43280 583 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 ITPKAP23677 461 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 MAPK8P45983 427 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 PTPN12Q05209 780 aaKnown RBP9.29□□□□□ -0.92
CCDC175-203ENST00000553317 GRM2Q14416 872 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 DSC3Q14574 896 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 POU4F3Q15319 338 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 CPSF6Q16630 551 aaKnown RBP eCLIP9.29□□□□□ -0.92
CCDC175-203ENST00000553317 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 PRPF40BQ6NWY9 871 aaKnown RBP9.29□□□□□ -0.92
CCDC175-203ENST00000553317 DTHD1Q6ZMT9 781 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 CORO1BQ9BR76 489 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 PIM2Q9P1W9 311 aa9.29□□□□□ -0.92
CCDC175-203ENST00000553317 WDR64B1ANS9 1081 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 MAOBP27338 520 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 RXRBP28702 533 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 FCGRTP55899 365 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 ABCB6Q9NP58 842 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 RAD18Q9NS91 495 aa9.28□□□□□ -0.92
CCDC175-203ENST00000553317 B3GALT4O96024 378 aa9.27□□□□□ -0.93
CCDC175-203ENST00000553317 PRNPP04156 253 aa9.27□□□□□ -0.93
CCDC175-203ENST00000553317 MAP4P27816 1152 aaKnown RBP9.27□□□□□ -0.93
CCDC175-203ENST00000553317 ZNF157P51786 506 aaPredicted RBP9.27□□□□□ -0.93
CCDC175-203ENST00000553317 F13BP05160 661 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 USP11P51784 963 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 ENOX2Q16206 610 aaKnown RBP9.26□□□□□ -0.93
CCDC175-203ENST00000553317 SGO2Q562F6 1265 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 RPS26P11Q5JNZ5 115 aaPredicted RBP9.26□□□□□ -0.93
CCDC175-203ENST00000553317 PI16Q6UXB8 463 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 NFXL1Q6ZNB6 911 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 MFSD14AQ96MC6 490 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 ASB16Q96NS5 453 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 BCO2Q9BYV7 579 aa9.26□□□□□ -0.93
CCDC175-203ENST00000553317 DLGAP3O95886 979 aa9.25□□□□□ -0.93
CCDC175-203ENST00000553317 ATP2B2Q01814 1243 aa9.25□□□□□ -0.93
CCDC175-203ENST00000553317 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.25□□□□□ -0.93
CCDC175-203ENST00000553317 GPN3Q9UHW5 284 aaPredicted RBP9.25□□□□□ -0.93
CCDC175-203ENST00000553317 DRD2P14416 443 aa9.24□□□□□ -0.93
CCDC175-203ENST00000553317 FOSL1P15407 271 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms