RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 LZTS2Q9BRK4 669 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 GOPCQ9HD26 462 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 RNF186Q9NXI6 227 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 LAMA2P24043 3122 aaKnown RBP5.83□□□□□ -1.48
PFDN5-219ENST00000553171 NCOR1O75376 2440 aa5.83□□□□□ -1.48
PFDN5-219ENST00000553171 CACNA1BQ00975 2339 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 RAD50Q92878 1312 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 TLDC2A0PJX2 215 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 ANKRD33BA6NCL7 494 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 PABPN1LA6NDY0 278 aaKnown RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 SPDYE4A6NLX3 237 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 TPPPO94811 219 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 IGHDP01880 384 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 EN2P19622 333 aaPredicted RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 ITGAEP38570 1179 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 MFSD4BQ5TF39 518 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 CCDC70Q6NSX1 233 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 CC2D1AQ6P1N0 951 aaPredicted RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 C16orf87Q6PH81 154 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 BHMTQ93088 406 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 SYTL4Q96C24 671 aaPredicted RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 TIGD1Q96MW7 591 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 ZNF396Q96N95 335 aaPredicted RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 FAM117AQ9C073 453 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.82□□□□□ -1.48
PFDN5-219ENST00000553171 CHIC2Q9UKJ5 165 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 TOGARAM1Q9Y4F4 1720 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 DAPK1P53355 1430 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 ANKRD50Q9ULJ7 1429 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 C5P01031 1676 aa5.82□□□□□ -1.48
PFDN5-219ENST00000553171 ROCK1Q13464 1354 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 KTN1Q86UP2 1357 aaKnown RBP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 USP47Q96K76 1375 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 ERICH4A6NGS2 130 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 H0YHG0 523 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 PPFIA2O75334 1257 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 CCDC159P0C7I6 412 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 CSB-PGBD3P0DP91 1061 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 SKILP12757 684 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 IL2RBP14784 551 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 CHRNA5P30532 468 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 EPHX2P34913 555 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 EIF4G2P78344 907 aaKnown RBP eCLIP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 TMF1P82094 1093 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 HNRNPUQ00839 825 aaKnown RBP eCLIP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 FOXK2Q01167 660 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 RASA3Q14644 834 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 SKIV2LQ15477 1246 aaKnown RBP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 TSNAXIP1Q2TAA8 658 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 FILIP1LQ4L180 1135 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 SOGA3Q5TF21 947 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 EGFLAMQ63HQ2 1017 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 Q7L0L9 218 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 TEKT1Q969V4 418 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 SYAP1Q96A49 352 aaPredicted RBP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 NEUROD6Q96NK8 337 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 EPAS1Q99814 870 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 BRINP2Q9C0B6 783 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 LRRC27Q9C0I9 530 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 HACL1Q9UJ83 578 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 PARP3Q9Y6F1 533 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 UBR3Q6ZT12 1888 aa5.81□□□□□ -1.48
PFDN5-219ENST00000553171 YTHDC2Q9H6S0 1430 aaKnown RBP5.81□□□□□ -1.48
PFDN5-219ENST00000553171 HIP1RO75146 1068 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 MTA2O94776 668 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 MS4A1P11836 297 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 CAPN2P17655 700 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 KCNJ4P48050 445 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 TBX4P57082 545 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 POU5F1BQ06416 359 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 TMED1Q13445 227 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 KCTD2Q14681 263 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 E2F5Q15329 346 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 ZNF394Q53GI3 561 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 TBC1D22AQ8WUA7 517 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 C17orf50Q8WW18 174 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 SPACA7Q96KW9 195 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 RMDN2Q96LZ7 410 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 ZHX3Q9H4I2 956 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 SPC25Q9HBM1 224 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 SFMBT1Q9UHJ3 866 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 TCEAL9Q9UHQ7 104 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 ACAD8Q9UKU7 415 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 USTQ9Y2C2 406 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 PCDHB13Q9Y5F0 798 aa5.8□□□□□ -1.48
PFDN5-219ENST00000553171 EIF3AQ14152 1382 aaKnown RBP5.8□□□□□ -1.48
PFDN5-219ENST00000553171 DICER1Q9UPY3 1922 aaKnown RBP5.8□□□□□ -1.48
PFDN5-219ENST00000553171 C4BP0C0L5 1744 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 ACEP12821 1306 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 TAF1LQ8IZX4 1826 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 TMCO5BA8MYB1 307 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 U2AF1L5P0DN76 240 aaPredicted RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 ZNF16P17020 682 aaPredicted RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 GUCY2CP25092 1073 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 TNNT3P45378 269 aaPredicted RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 U2AF1Q01081 240 aaKnown RBP eCLIP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 NKX1-1Q15270 411 aaPredicted RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 SDE2Q6IQ49 451 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 KRT77Q7Z794 578 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms