RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 NLGN1Q8N2Q7 840 aa9.78□□□□□ -0.84
RAB5B-210ENST00000553116 TOMM22Q9NS69 142 aa9.78□□□□□ -0.84
RAB5B-210ENST00000553116 SLC4A4Q9Y6R1 1079 aa9.78□□□□□ -0.84
RAB5B-210ENST00000553116 POLRMTO00411 1230 aaKnown RBP9.77□□□□□ -0.84
RAB5B-210ENST00000553116 NCLP19338 710 aaKnown RBP9.77□□□□□ -0.84
RAB5B-210ENST00000553116 NAA16Q6N069 864 aaPredicted RBP9.77□□□□□ -0.84
RAB5B-210ENST00000553116 FLAD1Q8NFF5 587 aa9.77□□□□□ -0.84
RAB5B-210ENST00000553116 NCOA7Q8NI08 942 aa9.77□□□□□ -0.84
RAB5B-210ENST00000553116 STRBPQ96SI9 672 aaKnown RBP9.77□□□□□ -0.84
RAB5B-210ENST00000553116 STX6O43752 255 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 UFL1O94874 794 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 BRD1O95696 1058 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 APOBRQ0VD83 1088 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 LCORLQ8N3X6 602 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 ZDHHC9Q9Y397 364 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 SEMA3EO15041 775 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 FOXP2O15409 715 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 MCM5P33992 734 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 SLC51AQ86UW1 340 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 STK11IPQ8N1F8 1099 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 GPR101Q96P66 508 aaPredicted RBP9.77□□□□□ -0.85
RAB5B-210ENST00000553116 ALDH8A1Q9H2A2 487 aaPredicted RBP9.77□□□□□ -0.85
RAB5B-210ENST00000553116 PARP3Q9Y6F1 533 aa9.77□□□□□ -0.85
RAB5B-210ENST00000553116 MAGEB6P1A0A0J9YX57 407 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 PATL2C9JE40 543 aaKnown RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 GNAT2P19087 354 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 SYT1P21579 422 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 ZNF804AQ7Z570 1209 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 FBXO33Q7Z6M2 555 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 LEMD3Q9Y2U8 911 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 DDX49Q9Y6V7 483 aaKnown RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 COL1A1P02452 1464 aaPredicted RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 PRC1O43663 620 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 MMP10P09238 476 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 LARP1BQ659C4 914 aaKnown RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 POTEAQ6S8J7 498 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 TXNRD3Q86VQ6 643 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 DZIP1Q86YF9 867 aaKnown RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 GGA1Q9UJY5 639 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 C6orf229H3BNL8 230 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 PRKAB2O43741 272 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 SKOR2Q2VWA4 1001 aaPredicted RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 RRP12Q5JTH9 1297 aaKnown RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 IFNL3Q8IZI9 196 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 FAM184AQ8NB25 1140 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 GTF3C6Q969F1 213 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 AKT1S1Q96B36 256 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 CHAMP1Q96JM3 812 aa9.76□□□□□ -0.85
RAB5B-210ENST00000553116 TMX4Q9H1E5 349 aaPredicted RBP9.76□□□□□ -0.85
RAB5B-210ENST00000553116 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
RAB5B-210ENST00000553116 PDCP20941 246 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 CCT2P78371 535 aaKnown RBP9.75□□□□□ -0.85
RAB5B-210ENST00000553116 ST3GAL1Q11201 340 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 CRY2Q49AN0 593 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 CHD4Q14839 1912 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 MINDY4BA8MYZ0 360 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 ZSCAN22P10073 491 aaPredicted RBP9.75□□□□□ -0.85
RAB5B-210ENST00000553116 GPSM2P81274 684 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 EN1Q05925 392 aaPredicted RBP9.75□□□□□ -0.85
RAB5B-210ENST00000553116 SF3B2Q13435 895 aaKnown RBP9.75□□□□□ -0.85
RAB5B-210ENST00000553116 SDR42E1Q8WUS8 393 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 DDX11Q96FC9 970 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 ATP6V1DQ9Y5K8 247 aa9.75□□□□□ -0.85
RAB5B-210ENST00000553116 BBOX1O75936 387 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 ADGRA1Q86SQ6 560 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 TBC1D10CQ8IV04 446 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 EPB41L4AQ9HCS5 686 aaPredicted RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 CCDC88AQ3V6T2 1871 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 TCHHQ07283 1943 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 B4E1Z4 1266 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 PPEF1O14829 653 aaPredicted RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 PRDX5P30044 214 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 EXOSC10Q01780 885 aaKnown RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 CTDSPL2Q05D32 466 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 CLEC17AQ6ZS10 378 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 TNS1Q9HBL0 1735 aaKnown RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 PNPLA7Q6ZV29 1317 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 GOLGA8BA8MQT2 603 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 GSG1L2A8MUP6 293 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 H3BQV1 296 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 FOSBP53539 338 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 DYNLL1P63167 89 aaKnown RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 EZH2Q15910 746 aaKnown RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 IFFO2Q5TF58 517 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 SPTY2D1Q68D10 685 aaPredicted RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 MFSD6Q6ZSS7 791 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 RAB11FIP4Q86YS3 637 aa9.74□□□□□ -0.85
RAB5B-210ENST00000553116 MB21D2Q8IYB1 491 aaPredicted RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 AATFQ9NY61 560 aaKnown RBP eCLIP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 RGS17Q9UGC6 210 aaPredicted RBP9.74□□□□□ -0.85
RAB5B-210ENST00000553116 KLF18A0A0U1RQI7 1052 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 JAK2O60674 1132 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 ATP2B4P23634 1241 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 MECOMQ03112 1051 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 SCRN1Q12765 414 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 NFXL1Q6ZNB6 911 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 FBXW7Q969H0 707 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 ZNF622Q969S3 477 aaKnown RBP eCLIP9.73□□□□□ -0.85
RAB5B-210ENST00000553116 BRIP1Q9BX63 1249 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 NCOA5Q9HCD5 579 aaKnown RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms