RNA–Protein interactions for RNA: ENST00000552973.1

NEK3-204, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-204ENST00000552973 INHBEP58166 350 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 TNFAIP1Q13829 316 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 PKN2Q16513 984 aaKnown RBP14.4□□□□□ -0.1
NEK3-204ENST00000552973 ANKRD13AQ8IZ07 590 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 PIAS4Q8N2W9 510 aaPredicted RBP14.4□□□□□ -0.1
NEK3-204ENST00000552973 VGLL2Q8N8G2 317 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 TMEM39BQ9GZU3 492 aa14.4□□□□□ -0.1
NEK3-204ENST00000552973 TEPSINQ96N21 525 aa14.39□□□□□ -0.11
NEK3-204ENST00000552973 CFHR5Q9BXR6 569 aa14.39□□□□□ -0.11
NEK3-204ENST00000552973 SMC4Q9NTJ3 1288 aa14.39□□□□□ -0.11
NEK3-204ENST00000552973 RFX5P48382 616 aaPredicted RBP14.38□□□□□ -0.11
NEK3-204ENST00000552973 NOM1Q5C9Z4 860 aaKnown RBP14.38□□□□□ -0.11
NEK3-204ENST00000552973 FBXO46Q6PJ61 603 aaPredicted RBP14.38□□□□□ -0.11
NEK3-204ENST00000552973 CNKSR2Q8WXI2 1034 aa14.38□□□□□ -0.11
NEK3-204ENST00000552973 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
NEK3-204ENST00000552973 TRIM17Q9Y577 477 aa14.38□□□□□ -0.11
NEK3-204ENST00000552973 AKAP11Q9UKA4 1901 aa14.38□□□□□ -0.11
NEK3-204ENST00000552973 CACNA1FO60840 1977 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 UNCXA6NJT0 531 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 EYA2O00167 538 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 IFIT1P09914 478 aaKnown RBP14.37□□□□□ -0.11
NEK3-204ENST00000552973 FGFR2P21802 821 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 TNNI2P48788 182 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 PUM3Q15397 648 aaKnown RBP14.37□□□□□ -0.11
NEK3-204ENST00000552973 ALDH1L2Q3SY69 923 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.37□□□□□ -0.11
NEK3-204ENST00000552973 TBC1D22AQ8WUA7 517 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 TEKT1Q969V4 418 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 PTPN18Q99952 460 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 SIL1Q9H173 461 aa14.37□□□□□ -0.11
NEK3-204ENST00000552973 NOB1Q9ULX3 412 aaKnown RBP14.37□□□□□ -0.11
NEK3-204ENST00000552973 MAP3K9P80192 1104 aa14.36□□□□□ -0.11
NEK3-204ENST00000552973 CRHR2Q13324 411 aa14.36□□□□□ -0.11
NEK3-204ENST00000552973 A0A1B0GUL6 1792 aa14.36□□□□□ -0.11
NEK3-204ENST00000552973 SLC5A1P13866 664 aa14.35□□□□□ -0.11
NEK3-204ENST00000552973 HDLBPQ00341 1268 aaKnown RBP14.35□□□□□ -0.11
NEK3-204ENST00000552973 VGLL4Q14135 290 aa14.35□□□□□ -0.11
NEK3-204ENST00000552973 OTUD7BQ6GQQ9 843 aa14.35□□□□□ -0.11
NEK3-204ENST00000552973 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
NEK3-204ENST00000552973 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
NEK3-204ENST00000552973 TESPA1A2RU30 521 aaPredicted RBP14.34□□□□□ -0.11
NEK3-204ENST00000552973 UBTFL1P0CB47 393 aaPredicted RBP14.34□□□□□ -0.11
NEK3-204ENST00000552973 OTOP1Q7RTM1 612 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 ATG9AQ7Z3C6 839 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 TRMT2AQ8IZ69 625 aaKnown RBP14.34□□□□□ -0.11
NEK3-204ENST00000552973 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.34□□□□□ -0.11
NEK3-204ENST00000552973 LPIN2Q92539 896 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 OTUD5Q96G74 571 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 MS4A4AQ96JQ5 239 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 ZDHHC15Q96MV8 337 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 TMOD2Q9NZR1 351 aa14.34□□□□□ -0.11
NEK3-204ENST00000552973 CCL15-CCL14A0A0B4J2E2 113 aa14.33□□□□□ -0.12
NEK3-204ENST00000552973 CCL15Q16663 113 aa14.33□□□□□ -0.12
NEK3-204ENST00000552973 MIGA2Q7L4E1 593 aa14.33□□□□□ -0.12
NEK3-204ENST00000552973 BRI3BPQ8WY22 251 aa14.33□□□□□ -0.12
NEK3-204ENST00000552973 PA2G4Q9UQ80 394 aaKnown RBP14.33□□□□□ -0.12
NEK3-204ENST00000552973 CSADQ9Y600 493 aa14.33□□□□□ -0.12
NEK3-204ENST00000552973 CAP1Q01518 475 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 HHIPL2Q6UWX4 724 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 ZKSCAN4Q969J2 545 aaPredicted RBP14.32□□□□□ -0.12
NEK3-204ENST00000552973 ERO1AQ96HE7 468 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 WRNIP1Q96S55 665 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 MRIQ9BWK5 157 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 CEP126Q9P2H0 1117 aa14.32□□□□□ -0.12
NEK3-204ENST00000552973 LRRFIP2Q9Y608 721 aaKnown RBP14.32□□□□□ -0.12
NEK3-204ENST00000552973 GTF2A2P52657 109 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 SP3Q02447 781 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 TCP10Q12799 353 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 ATP2B3Q16720 1220 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 FAM43AQ8N2R8 423 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 WDR66Q8TBY9 1149 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 API5Q9BZZ5 524 aaKnown RBP14.31□□□□□ -0.12
NEK3-204ENST00000552973 EFCC1Q9HA90 598 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 SUGT1Q9Y2Z0 365 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 SNCAIPQ9Y6H5 919 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 MAST3O60307 1309 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 KIF16BQ96L93 1317 aa14.31□□□□□ -0.12
NEK3-204ENST00000552973 PRDX5P30044 214 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 TAF1CQ15572 869 aaPredicted RBP14.3□□□□□ -0.12
NEK3-204ENST00000552973 FAM83AQ86UY5 434 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 MEIS3Q99687 375 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 ZFYVE28Q9HCC9 887 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 PTPN22Q9Y2R2 807 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 DAGLAQ9Y4D2 1042 aa14.3□□□□□ -0.12
NEK3-204ENST00000552973 SPDYE5A6NIY4 337 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 CIAO1O76071 339 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 ECM2O94769 699 aaPredicted RBP14.29□□□□□ -0.12
NEK3-204ENST00000552973 SLC34A2O95436 690 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 ADORA1P30542 326 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 PHKA1P46020 1223 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 CDC42EP5Q6NZY7 148 aa14.29□□□□□ -0.12
NEK3-204ENST00000552973 GNL3LQ9NVN8 582 aaKnown RBP14.29□□□□□ -0.12
NEK3-204ENST00000552973 POTEFA5A3E0 1075 aa14.28□□□□□ -0.12
NEK3-204ENST00000552973 IRF6O14896 467 aa14.28□□□□□ -0.12
NEK3-204ENST00000552973 LDHBP07195 334 aaKnown RBP14.28□□□□□ -0.12
NEK3-204ENST00000552973 INPP5BP32019 993 aa14.28□□□□□ -0.12
NEK3-204ENST00000552973 IL15P40933 162 aaPredicted RBP14.28□□□□□ -0.12
NEK3-204ENST00000552973 RARSP54136 660 aaKnown RBP14.28□□□□□ -0.12
NEK3-204ENST00000552973 TIMM10P62072 90 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms