RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ATG3Q9NT62 314 aa12.44□□□□□ -0.42
TGFBR1-209ENST00000552516 SPATA31A3Q5VYP0 1347 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 ARAP3Q8WWN8 1544 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 A0A0U1RQG5 324 aaPredicted RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 TPM2P07951 284 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 PDE6AP16499 860 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 USP28Q96RU2 1077 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 HIBADHP31937 336 aaKnown RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 SP4Q02446 784 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 DIXDC1Q155Q3 683 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 TRMT44Q8IYL2 757 aaKnown RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 CDC25AP30304 524 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 CBX1P83916 185 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 ZBTB38Q8NAP3 1195 aaPredicted RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 SEPT11Q9NVA2 429 aaKnown RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 SCAF8Q9UPN6 1271 aaKnown RBP12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 ERVV-2B6SEH9 535 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 MTMR6Q9Y217 621 aa12.43□□□□□ -0.42
TGFBR1-209ENST00000552516 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 RIMBP3CA6NJZ7 1639 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 RIMBP3BA6NNM3 1639 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 RIMBP3Q9UFD9 1639 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 LDHBP07195 334 aaKnown RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 NLRP10Q86W26 655 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 PPFIBP1Q86W92 1011 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 ANO10Q9NW15 660 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 DENND2AQ9ULE3 1009 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 MAST3O60307 1309 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 BRD1O95696 1058 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 PDE4BQ07343 736 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 ZFYVE27Q5T4F4 411 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 LEO1Q8WVC0 666 aaPredicted RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 RNF41Q9H4P4 317 aaPredicted RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 CFAP74Q9C0B2 1584 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 INO80Q9ULG1 1556 aaPredicted RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 GTF2IP78347 998 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 ZFYP08048 801 aaPredicted RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 ZNF771Q7L3S4 317 aaPredicted RBP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 CCDC112Q8NEF3 446 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.42□□□□□ -0.42
TGFBR1-209ENST00000552516 TNNT1P13805 278 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 SFPQP23246 707 aaKnown RBP eCLIP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 ST5P78524 1137 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 MRPS27Q92552 414 aaKnown RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 URI1O94763 535 aaPredicted RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 MYCNP04198 464 aaPredicted RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 EIF5P55010 431 aaKnown RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 PIK3AP1Q6ZUJ8 805 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 CAGE1Q8TC20 777 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 APBA3O96018 575 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 PIH1D3Q9NQM4 214 aaKnown RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 MAGEC2Q9UBF1 373 aaPredicted RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 PRKCSHP14314 528 aaPredicted RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 TNNI2P48788 182 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 GOLGA8FQ08AF8 430 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 GOLGA8DPQ0D2H9 430 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 GIGYF2Q6Y7W6 1299 aaKnown RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 LPIN2Q92539 896 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 MAP3K15Q6ZN16 1313 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 RPS8P62241 208 aaKnown RBP12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 FAM193AP78312 1265 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 LRMPQ12912 555 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 RASGRP4Q8TDF6 673 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 HAUS7Q99871 368 aa12.41□□□□□ -0.42
TGFBR1-209ENST00000552516 CCDC196A0A1B0GTZ2 297 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 CCDC178Q5BJE1 867 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 KIAA0825Q8IV33 1275 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 GPKOWQ92917 476 aaPredicted RBP eCLIP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 LONRF3Q496Y0 759 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 FEZ1Q99689 392 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 IFNKQ9P0W0 207 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 FBXO3Q9UK99 471 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 BAG3O95817 575 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 CACNB3P54284 484 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 GRM1Q13255 1194 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 PLS1Q14651 629 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 FILIP1LQ4L180 1135 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 COPRSQ9NQ92 184 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.4□□□□□ -0.428e-7■■■■■ 78.2
TGFBR1-209ENST00000552516 DDX19AQ9NUU7 478 aaKnown RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 ZBTB21Q9ULJ3 1066 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 ANGEL1Q9UNK9 670 aaKnown RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 WTIPA6NIX2 430 aaPredicted RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 PDE8BO95263 885 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 TOP1P11387 765 aaKnown RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 UBA7P41226 1012 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 MCAMP43121 646 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 NOM1Q5C9Z4 860 aaKnown RBP12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 DRC1Q96MC2 740 aa12.4□□□□□ -0.42
TGFBR1-209ENST00000552516 CDC42BPGQ6DT37 1551 aa12.4□□□□□ -0.43
TGFBR1-209ENST00000552516 BTBD18B2RXH4 712 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 NAPAP54920 295 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 LETM2Q2VYF4 491 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 TEX11Q8IYF3 940 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 MAP4K1Q92918 833 aa12.39□□□□□ -0.43
TGFBR1-209ENST00000552516 JAKMIP3Q5VZ66 844 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms