RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-223ENST00000552480 MPNDQ8N594 471 aa15.12■□□□□ 0.01
CACNB3-223ENST00000552480 CNKSR1Q969H4 720 aa15.12■□□□□ 0.01
CACNB3-223ENST00000552480 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
CACNB3-223ENST00000552480 CIZ1Q9ULV3 898 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-223ENST00000552480 LAMA4Q16363 1823 aa15.12■□□□□ 0.01
CACNB3-223ENST00000552480 FGAP02671 866 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 CUL4AQ13619 759 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 NAA16Q6N069 864 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-223ENST00000552480 NSUN4Q96CB9 384 aaKnown RBP15.11■□□□□ 0.01
CACNB3-223ENST00000552480 NEK1Q96PY6 1258 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 ARMT1Q9H993 441 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 CD209Q9NNX6 404 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 CHMP5Q9NZZ3 219 aa15.11■□□□□ 0.01
CACNB3-223ENST00000552480 CCDC88AQ3V6T2 1871 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 MAGEB6P1A0A0J9YX57 407 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 PATL2C9JE40 543 aaKnown RBP15.1■□□□□ 0.01
CACNB3-223ENST00000552480 HMGB1P09429 215 aaKnown RBP15.1■□□□□ 0.01
CACNB3-223ENST00000552480 MECOMQ03112 1051 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 ANKRD1Q15327 319 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 TTLL5Q6EMB2 1281 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 DPP8Q6V1X1 898 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-223ENST00000552480 STOX1Q6ZVD7 989 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 NOL8Q76FK4 1167 aaKnown RBP15.1■□□□□ 0.01
CACNB3-223ENST00000552480 LCORLQ8N3X6 602 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 LIMCH1Q9UPQ0 1083 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 KIF13BQ9NQT8 1826 aa15.1■□□□□ 0.01
CACNB3-223ENST00000552480 E7EWF7 191 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 APPP05067 770 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 CHRNA5P30532 468 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 ADGRA1Q86SQ6 560 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 ZNF384Q8TF68 577 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 ZSCAN31Q96LW9 406 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-223ENST00000552480 EYA3Q99504 573 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 COA1Q9GZY4 146 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 FOXD4L1Q9NU39 408 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 TIAM2Q8IVF5 1701 aa15.09■□□□□ 0.01
CACNB3-223ENST00000552480 SLX4Q8IY92 1834 aa15.08■□□□□ 0.01
CACNB3-223ENST00000552480 A0A0G2JLW4 131 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 GSG1L2A8MUP6 293 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 ZNF213O14771 459 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 LDHBP07195 334 aaKnown RBP15.08■□□□□ 0
CACNB3-223ENST00000552480 PRDX5P30044 214 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 OLFM4Q6UX06 510 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 IFNL3Q8IZI9 196 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 INTS4Q96HW7 963 aaKnown RBP15.08■□□□□ 0
CACNB3-223ENST00000552480 RIOK1Q9BRS2 568 aaKnown RBP15.08■□□□□ 0
CACNB3-223ENST00000552480 NACAP1Q9BZK3 213 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 CWC22Q9HCG8 908 aaKnown RBP15.08■□□□□ 0
CACNB3-223ENST00000552480 EPB41L4AQ9HCS5 686 aaPredicted RBP15.08■□□□□ 0
CACNB3-223ENST00000552480 SLC4A4Q9Y6R1 1079 aa15.08■□□□□ 0
CACNB3-223ENST00000552480 GSTO1P78417 241 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 COL9A3Q14050 684 aaPredicted RBP15.07■□□□□ 0
CACNB3-223ENST00000552480 CC2D2BQ6DHV5 1058 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 DZIP1Q86YF9 867 aaKnown RBP15.07■□□□□ 0
CACNB3-223ENST00000552480 TBC1D22AQ8WUA7 517 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 ZC3H12CQ9C0D7 883 aaKnown RBP15.07■□□□□ 0
CACNB3-223ENST00000552480 NAPBQ9H115 298 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 SH2B1Q9NRF2 756 aaPredicted RBP15.07■□□□□ 0
CACNB3-223ENST00000552480 JAG2Q9Y219 1238 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 FAM205AQ6ZU69 1335 aa15.07■□□□□ 0
CACNB3-223ENST00000552480 RIMBP2O15034 1052 aa15.06■□□□□ 0
CACNB3-223ENST00000552480 HAND2P61296 217 aa15.06■□□□□ 0
CACNB3-223ENST00000552480 TOB2Q14106 344 aaPredicted RBP15.06■□□□□ 0
CACNB3-223ENST00000552480 DHX32Q7L7V1 743 aaKnown RBP15.06■□□□□ 0
CACNB3-223ENST00000552480 C7orf43Q8WVR3 580 aa15.06■□□□□ 0
CACNB3-223ENST00000552480 RTFDC1Q9BY42 306 aaPredicted RBP15.06■□□□□ 0
CACNB3-223ENST00000552480 MTFR1LQ9H019 292 aa15.06■□□□□ 0
CACNB3-223ENST00000552480 SNED1Q8TER0 1413 aa15.06■□□□□ 0
CACNB3-223ENST00000552480 PRKAB2O43741 272 aa15.05■□□□□ -0
CACNB3-223ENST00000552480 TDO2P48775 406 aa15.05■□□□□ -0
CACNB3-223ENST00000552480 DYNLL1P63167 89 aaKnown RBP15.05■□□□□ -0
CACNB3-223ENST00000552480 EXOSC10Q01780 885 aaKnown RBP15.05■□□□□ -0
CACNB3-223ENST00000552480 GRIPAP1Q4V328 841 aa15.05■□□□□ -0
CACNB3-223ENST00000552480 NBPF3Q9H094 633 aa15.05■□□□□ -0
CACNB3-223ENST00000552480 WDR19Q8NEZ3 1342 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 ZBTB7AO95365 584 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 LDHCP07864 332 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 POLD1P28340 1107 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 GIMAP6Q6P9H5 292 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 Q6ZUG5 572 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 RALYLQ86SE5 291 aaKnown RBP15.04■□□□□ -0
CACNB3-223ENST00000552480 MB21D2Q8IYB1 491 aaPredicted RBP15.04■□□□□ -0
CACNB3-223ENST00000552480 NCOA7Q8NI08 942 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 TCEANC2Q96MN5 208 aa15.04■□□□□ -0
CACNB3-223ENST00000552480 CRNKL1Q9BZJ0 848 aaKnown RBP15.04■□□□□ -0
CACNB3-223ENST00000552480 MROH7-TTC4A0A0A0MT08 1334 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 LARGE1O95461 756 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 GRIK5Q16478 980 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 MFSD14BQ5SR56 506 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 CERS3Q8IU89 383 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 TBC1D10CQ8IV04 446 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 FBXL16Q8N461 479 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 TTLL6Q8N841 843 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 SUPT20HQ8NEM7 779 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 AGXT2Q9BYV1 514 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 TPCN1Q9ULQ1 816 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 SUGT1Q9Y2Z0 365 aa15.03■□□□□ -0
CACNB3-223ENST00000552480 G3V3G9 751 aa15.02■□□□□ -0
CACNB3-223ENST00000552480 DPEP1P16444 411 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms