RNA–Protein interactions for RNA: ENST00000551920.1

GCN1-209, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-209ENST00000551920 SCAF8Q9UPN6 1271 aaKnown RBP20.08■□□□□ 0.81
GCN1-209ENST00000551920 SUGT1Q9Y2Z0 365 aa20.08■□□□□ 0.81
GCN1-209ENST00000551920 ADM5C9JUS6 153 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 UQCRFS1P1P0C7P4 283 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 HSPA6P17066 643 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 CRKP46108 304 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 CCDC158Q5M9N0 1113 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 PRMT6Q96LA8 375 aaPredicted RBP20.07■□□□□ 0.8
GCN1-209ENST00000551920 AKAP11Q9UKA4 1901 aa20.07■□□□□ 0.8
GCN1-209ENST00000551920 DLGAP5Q15398 846 aa20.06■□□□□ 0.8
GCN1-209ENST00000551920 DIXDC1Q155Q3 683 aa20.06■□□□□ 0.8
GCN1-209ENST00000551920 TBC1D9Q6ZT07 1266 aa20.06■□□□□ 0.8
GCN1-209ENST00000551920 IFIT2P09913 472 aaKnown RBP20.05■□□□□ 0.8
GCN1-209ENST00000551920 KRT26Q7Z3Y9 468 aa20.05■□□□□ 0.8
GCN1-209ENST00000551920 ZNF384Q8TF68 577 aa20.05■□□□□ 0.8
GCN1-209ENST00000551920 NDUFB9Q9Y6M9 179 aa20.05■□□□□ 0.8
GCN1-209ENST00000551920 PITPNM2Q9BZ72 1349 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 IGHDP01880 384 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 CYP2E1P05181 493 aaPredicted RBP20.04■□□□□ 0.8
GCN1-209ENST00000551920 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
GCN1-209ENST00000551920 ZAP70P43403 619 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
GCN1-209ENST00000551920 HTRA3P83110 453 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 HDLBPQ00341 1268 aaKnown RBP20.04■□□□□ 0.8
GCN1-209ENST00000551920 USP48Q86UV5 1035 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 DCPSQ96C86 337 aaKnown RBP20.04■□□□□ 0.8
GCN1-209ENST00000551920 ABCF2Q9UG63 623 aa20.04■□□□□ 0.8
GCN1-209ENST00000551920 MAST3O60307 1309 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 APLP1P51693 650 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 APOBEC3HQ6NTF7 200 aaKnown RBP20.03■□□□□ 0.8
GCN1-209ENST00000551920 CDC37L1Q7L3B6 337 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 TEKT1Q969V4 418 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 ZDHHC15Q96MV8 337 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 DAGLAQ9Y4D2 1042 aa20.03■□□□□ 0.8
GCN1-209ENST00000551920 ECM29Q5VYK3 1845 aa20.02■□□□□ 0.8
GCN1-209ENST00000551920 ZGPATQ8N5A5 531 aaKnown RBP20.02■□□□□ 0.8
GCN1-209ENST00000551920 OTUD7AQ8TE49 926 aaPredicted RBP20.02■□□□□ 0.8
GCN1-209ENST00000551920 PIH1D3Q9NQM4 214 aaKnown RBP20.02■□□□□ 0.8
GCN1-209ENST00000551920 MAST2Q6P0Q8 1798 aa20.02■□□□□ 0.8
GCN1-209ENST00000551920 MECOMQ03112 1051 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 SPDYE2Q495Y8 402 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 CST9Q5W186 159 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 HHIPL2Q6UWX4 724 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 SULF1Q8IWU6 871 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 MRIQ9BWK5 157 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 ANTXR1Q9H6X2 564 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 TDRD3Q9H7E2 651 aaKnown RBP20.01■□□□□ 0.79
GCN1-209ENST00000551920 GAKO14976 1311 aa20.01■□□□□ 0.79
GCN1-209ENST00000551920 TSHZ3Q63HK5 1081 aa20■□□□□ 0.79
GCN1-209ENST00000551920 DZIP1Q86YF9 867 aaKnown RBP20■□□□□ 0.79
GCN1-209ENST00000551920 SMC5Q8IY18 1101 aa20■□□□□ 0.79
GCN1-209ENST00000551920 GCC1Q96CN9 775 aa20■□□□□ 0.79
GCN1-209ENST00000551920 ZNF70Q9UC06 446 aaPredicted RBP20■□□□□ 0.79
GCN1-209ENST00000551920 PRAMEF18Q5VWM3 479 aa19.99■□□□□ 0.79
GCN1-209ENST00000551920 SPTY2D1Q68D10 685 aaPredicted RBP19.99■□□□□ 0.79
GCN1-209ENST00000551920 ERICH6Q7L0X2 663 aa19.99■□□□□ 0.79
GCN1-209ENST00000551920 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
GCN1-209ENST00000551920 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.99■□□□□ 0.79
GCN1-209ENST00000551920 NSUN4Q96CB9 384 aaKnown RBP19.99■□□□□ 0.79
GCN1-209ENST00000551920 CDCA5Q96FF9 252 aa19.99■□□□□ 0.79
GCN1-209ENST00000551920 RWDD1Q9H446 243 aaPredicted RBP19.99■□□□□ 0.79
GCN1-209ENST00000551920 DOCK2Q92608 1830 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 POLR2AP24928 1970 aaKnown RBP19.98■□□□□ 0.79
GCN1-209ENST00000551920 ATP5JP18859 108 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 CACNB3P54284 484 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 EDC3Q96F86 508 aaKnown RBP19.98■□□□□ 0.79
GCN1-209ENST00000551920 VEZTQ9HBM0 779 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 SSC5DA1L4H1 1573 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 MROH7-TTC4A0A0A0MT08 1334 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 SALL3Q9BXA9 1300 aa19.98■□□□□ 0.79
GCN1-209ENST00000551920 MYO1BO43795 1136 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 CELF2O95319 508 aaKnown RBP19.97■□□□□ 0.79
GCN1-209ENST00000551920 ANKRD45Q5TZF3 282 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 ZNF408Q9H9D4 720 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 CREBZFQ9NS37 354 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 RAI14Q9P0K7 980 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 LRP2BPQ9P2M1 347 aa19.97■□□□□ 0.79
GCN1-209ENST00000551920 TRPM7Q96QT4 1865 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 MYO5AQ9Y4I1 1855 aaKnown RBP19.96■□□□□ 0.79
GCN1-209ENST00000551920 CNTNAP1P78357 1384 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 RFX7Q2KHR2 1363 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 TMEM88BA6NKF7 163 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 CDC42EP5Q6NZY7 148 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 ADGRA1Q86SQ6 560 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 CDAN1Q8IWY9 1227 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 FAM163AQ96GL9 167 aaPredicted RBP19.96■□□□□ 0.79
GCN1-209ENST00000551920 DNAJC2Q99543 621 aaKnown RBP19.96■□□□□ 0.79
GCN1-209ENST00000551920 DEFB129Q9H1M3 183 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 BOLA2Q9H3K6 86 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 ECHDC1Q9NTX5 307 aa19.96■□□□□ 0.79
GCN1-209ENST00000551920 GOLIM4O00461 696 aa19.95■□□□□ 0.78
GCN1-209ENST00000551920 HAUS7Q99871 368 aa19.95■□□□□ 0.78
GCN1-209ENST00000551920 MYH2Q9UKX2 1941 aa19.95■□□□□ 0.78
GCN1-209ENST00000551920 TCP10L2B9ZVM9 353 aa19.94■□□□□ 0.78
GCN1-209ENST00000551920 IDH1O75874 414 aaKnown RBP19.94■□□□□ 0.78
GCN1-209ENST00000551920 RASA3Q14644 834 aa19.94■□□□□ 0.78
GCN1-209ENST00000551920 BTDP43251 543 aa19.93■□□□□ 0.78
GCN1-209ENST00000551920 NFIAQ12857 509 aa19.93■□□□□ 0.78
GCN1-209ENST00000551920 B4GALNT3Q6L9W6 998 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms