RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, human

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-208	ENST00000551338	KRT27	Q7Z3Y8	459 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	TBC1D10C	Q8IV04	446 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	GDPD2	Q9HCC8	539 aa		13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB5C-208	ENST00000551338	ZNF213	O14771	459 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	PRC1	O43663	620 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	GADD45B	O75293	160 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	CTDNEP1	O95476	244 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	XRCC6	P12956	609 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	PDIA4	P13667	645 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	NCL	P19338	710 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	USP48	Q86UV5	1035 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	NSUN7	Q8NE18	718 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	NAV1	Q8NEY1	1877 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	NCOA7	Q8NI08	942 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	NKX2-3	Q8TAU0	364 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	AIDA	Q96BJ3	306 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	LLPH	Q9BRT6	129 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	ARMT1	Q9H993	441 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	GPHN	Q9NQX3	736 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	DUOX1	Q9NRD9	1551 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	TMEM63C	Q9P1W3	806 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	PNPLA7	Q6ZV29	1317 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	SALL1	Q9NSC2	1324 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	IRS2	Q9Y4H2	1338 aa		13.6	□□□□□ -0.23
RAB5C-208	ENST00000551338	COL11A2	P13942	1736 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	KLRK1	P26718	216 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	PDIA3	P30101	505 aa	Known RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	SLC27A3	Q5K4L6	730 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	FBXO33	Q7Z6M2	555 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	RALYL	Q86SE5	291 aa	Known RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	LCORL	Q8N3X6	602 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	ZNF274	Q96GC6	653 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	FAM84B	Q96KN1	310 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	GRPEL1	Q9HAV7	217 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	GNL3L	Q9NVN8	582 aa	Known RBP	13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	BRPF3	Q9ULD4	1205 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	DENND2A	Q9ULE3	1009 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	ATP6V1D	Q9Y5K8	247 aa		13.59	□□□□□ -0.23
RAB5C-208	ENST00000551338	PTPDC1	A2A3K4	754 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	GSG1L2	A8MUP6	293 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	PATL2	C9JE40	543 aa	Known RBP	13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	GYS1	P13807	737 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	MCM5	P33992	734 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	MRE11	P49959	708 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	DNM1	Q05193	864 aa	Known RBP	13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	ZSCAN23	Q3MJ62	389 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	PRR5L	Q6MZQ0	368 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	IFNL3	Q8IZI9	196 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	ANKRD2	Q9GZV1	360 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	TACC3	Q9Y6A5	838 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	NEDD4	P46934	1319 aa		13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	PDS5A	Q29RF7	1337 aa	Known RBP	13.58	□□□□□ -0.24
RAB5C-208	ENST00000551338	SEMA3E	O15041	775 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	ZBTB22	O15209	634 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	FIBP	O43427	364 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	PRKAB2	O43741	272 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	TRIM37	O94972	964 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	APP	P05067	770 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	CCT2	P78371	535 aa	Known RBP	13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	REST	Q13127	1097 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	CAVIN4	Q5BKX8	364 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	CYB5R4	Q7L1T6	521 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	ADGRA1	Q86SQ6	560 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	SLC51A	Q86UW1	340 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	CNBD1	Q8NA66	436 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	PANK2	Q9BZ23	570 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	NAPB	Q9H115	298 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	NCOA5	Q9HCD5	579 aa	Known RBP	13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	LRP2BP	Q9P2M1	347 aa		13.57	□□□□□ -0.24
RAB5C-208	ENST00000551338	SH2B2	O14492	632 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	GNAT2	P19087	354 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	CYP7A1	P22680	504 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	HMGN5	P82970	282 aa	Known RBP	13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	GRAP	Q13588	217 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	FERMT3	Q86UX7	667 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	GRAPL	Q8TC17	118 aa	Predicted RBP	13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	DDX11	Q96FC9	970 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	QSER1	Q2KHR3	1735 aa		13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	DDX60L	Q5H9U9	1706 aa	Known RBP	13.56	□□□□□ -0.24
RAB5C-208	ENST00000551338	FOCAD	Q5VW36	1801 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	KLF18	A0A0U1RQI7	1052 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338		B4E1Z4	1266 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	NPHP1	O15259	732 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	CTDSPL2	Q05D32	466 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	MIGA1	Q8NAN2	632 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	ZNF384	Q8TF68	577 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	TFCP2L1	Q9NZI6	479 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	RAI14	Q9P0K7	980 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	ABCF2	Q9UG63	623 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	HPS5	Q9UPZ3	1129 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	SLC4A4	Q9Y6R1	1079 aa		13.55	□□□□□ -0.24
RAB5C-208	ENST00000551338	GOLGA8B	A8MQT2	603 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	SERPINB2	P05120	415 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	UBE2H	P62256	183 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	DDR1	Q08345	913 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	TRDN	Q13061	729 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	TXNRD1	Q16881	649 aa		13.54	□□□□□ -0.24
RAB5C-208	ENST00000551338	FAM173B	Q6P4H8	233 aa		13.54	□□□□□ -0.24

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