RNA–Protein interactions for RNA: ENST00000551219.5

PTPRR-211, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 2,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-211ENST00000551219 STK38Q15208 465 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 ELF2Q15723 593 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 DDX46Q7L014 1031 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 FCHSD1Q86WN1 690 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 TIGD1Q96MW7 591 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 SEC62Q99442 399 aaKnown RBP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.75□□□□□ -1.17
PTPRR-211ENST00000551219 FER1L4A9Z1Z3 1794 aa7.75□□□□□ -1.17
PTPRR-211ENST00000551219 KIF1AQ12756 1690 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SMC2O95347 1197 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SLC3A2P08195 630 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 TPM1P09493 284 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 NAA30Q147X3 362 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 CCDC93Q567U6 631 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 E4F1Q66K89 784 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SND1Q7KZF4 910 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 LRP10Q7Z4F1 713 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 PSMD1Q99460 953 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 LRRC2Q9BYS8 371 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 FTOQ9C0B1 505 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 PRDM16Q9HAZ2 1276 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 TRMT1Q9NXH9 659 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SCN11AQ9UI33 1791 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 KDM6AO15550 1401 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 ERBB3P21860 1342 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SPTLC2O15270 562 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 RNF113AO15541 343 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 MYL6BP14649 208 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 IL15P40933 162 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 CASP7P55210 303 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 TMC6Q7Z403 805 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 C8orf76Q96K31 380 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 XPO4Q9C0E2 1151 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 ARGLU1Q9NWB6 273 aaPredicted RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 SSUH2Q9Y2M2 353 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 LAMA4Q16363 1823 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 HSPD1P10809 573 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 CMA1P23946 247 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 NDUFA8P51970 172 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 CCT2P78371 535 aaKnown RBP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 ESCO1Q5FWF5 840 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 UBE3BQ7Z3V4 1068 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 PLBD2Q8NHP8 589 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 IFNKQ9P0W0 207 aa7.74□□□□□ -1.17
PTPRR-211ENST00000551219 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRR-211ENST00000551219 MAST3O60307 1309 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 A0A087WZG4 1122 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 GOLIM4O00461 696 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ZFYP08048 801 aaPredicted RBP7.73□□□□□ -1.17
PTPRR-211ENST00000551219 FOSBP53539 338 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 DPCR1Q3MIW9 517 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ARMCX5Q6P1M9 558 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 RAPGEF4Q8WZA2 1011 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 FAM212AQ96EL1 285 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ATG3Q9NT62 314 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ARFGEF2Q9Y6D5 1785 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ABCC12Q96J65 1359 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 AFDNP55196 1824 aaKnown RBP7.73□□□□□ -1.17
PTPRR-211ENST00000551219 A0A1B0GVL5 298 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 ATP8B1O43520 1251 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 CIAO1O76071 339 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 MYSM1Q5VVJ2 828 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 SYNE3Q6ZMZ3 975 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 TTC5Q8N0Z6 440 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 JMYQ8N9B5 988 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 FBXO18Q8NFZ0 1043 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 FMNL2Q96PY5 1086 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 NCOA5Q9HCD5 579 aaKnown RBP7.73□□□□□ -1.17
PTPRR-211ENST00000551219 LAMB4A4D0S4 1761 aa7.73□□□□□ -1.17
PTPRR-211ENST00000551219 NEDD4P46934 1319 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 GOLGA6L9A6NEM1 432 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 ZNF202O95125 648 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 FDPSP14324 419 aaKnown RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 PHKG2P15735 406 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 TATP17735 454 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 ETF1P62495 437 aaKnown RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 IMMTQ16891 758 aaKnown RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 ANO1Q5XXA6 986 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 SYT10Q6XYQ8 523 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 GIGYF2Q6Y7W6 1299 aaKnown RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 NAP1L2Q9ULW6 460 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 CLIC4Q9Y696 253 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 TRPM3Q9HCF6 1732 aaPredicted RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 FAM237AA0A1B0GTK4 181 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 H7C1W4 665 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 ZSCAN12O43309 604 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 IFIT1P09914 478 aaKnown RBP7.72□□□□□ -1.17
PTPRR-211ENST00000551219 FANCCQ00597 558 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 GUCY1B3Q02153 619 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 NCAPHQ15003 741 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 LMBR1LQ6UX01 489 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 ATG9AQ7Z3C6 839 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 GLMNQ92990 594 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 CALCOCO1Q9P1Z2 691 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 TUBE1Q9UJT0 475 aa7.72□□□□□ -1.17
PTPRR-211ENST00000551219 PPP6R2O75170 966 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 FOXO4P98177 505 aa7.71□□□□□ -1.17
PTPRR-211ENST00000551219 ELOA2Q8IYF1 753 aaPredicted RBP7.71□□□□□ -1.17
PTPRR-211ENST00000551219 IFNL2Q8IZJ0 200 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms