RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GARTP22102 1010 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 ARNTP27540 789 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 PIP4K2BP78356 416 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 LMNB2Q03252 620 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 PAK2Q13177 524 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 WFDC8Q8IUA0 241 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 ZNF296Q8WUU4 475 aaPredicted RBP7.74□□□□□ -1.17
LIMA1-205ENST00000550592 ZNF775Q96BV0 537 aaPredicted RBP7.74□□□□□ -1.17
LIMA1-205ENST00000550592 DRC1Q96MC2 740 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 OSGEPQ9NPF4 335 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 CYP8B1Q9UNU6 501 aa7.74□□□□□ -1.17
LIMA1-205ENST00000550592 LINC01387J3KSC0 135 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 PF4P02776 101 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 TFE3P19532 575 aaPredicted RBP7.73□□□□□ -1.17
LIMA1-205ENST00000550592 CAMK2GQ13555 558 aaPredicted RBP7.73□□□□□ -1.17
LIMA1-205ENST00000550592 SF3A1Q15459 793 aaKnown RBP7.73□□□□□ -1.17
LIMA1-205ENST00000550592 RASIP1Q5U651 963 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 HGSNATQ68CP4 663 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 FAM117BQ6P1L5 589 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 FBXL19Q6PCT2 694 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 TREML4Q6UXN2 200 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 CCDC84Q86UT8 332 aaPredicted RBP7.73□□□□□ -1.17
LIMA1-205ENST00000550592 KIAA0825Q8IV33 1275 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 RASGRP4Q8TDF6 673 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 STK35Q8TDR2 534 aa7.73□□□□□ -1.17
LIMA1-205ENST00000550592 TM4SF5O14894 197 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 FSCN2O14926 492 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 NID1P14543 1247 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 HOXB4P17483 251 aaPredicted RBP7.72□□□□□ -1.17
LIMA1-205ENST00000550592 AMPD1P23109 780 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 CDC25BP30305 580 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 ARL4DP49703 201 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 C19orf57Q0VDD7 668 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 AP3B2Q13367 1082 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 LRRC14Q15048 493 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 LCE2AQ5TA79 106 aaPredicted RBP7.72□□□□□ -1.17
LIMA1-205ENST00000550592 SCARA3Q6AZY7 606 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 SULF2Q8IWU5 870 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 TRIM42Q8IWZ5 723 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 WHAMMQ8TF30 809 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 NT5C1AQ9BXI3 368 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 EMILIN2Q9BXX0 1053 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 USP35Q9P2H5 1018 aa7.72□□□□□ -1.17
LIMA1-205ENST00000550592 DGKGP49619 791 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 ZNF252P-AS1Q0IIN9 211 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 TXNDC11Q6PKC3 985 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 PDZD3Q86UT5 571 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 VPS37DQ86XT2 251 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 GPRASP2Q96D09 838 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 EAF1Q96JC9 268 aaPredicted RBP7.71□□□□□ -1.18
LIMA1-205ENST00000550592 SPATA32Q96LK8 384 aa7.71□□□□□ -1.18
LIMA1-205ENST00000550592 SUPT16HQ9Y5B9 1047 aaKnown RBP7.71□□□□□ -1.18
LIMA1-205ENST00000550592 GSTM4Q03013 218 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 ARID5AQ03989 594 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 FAM160A1Q05DH4 1040 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 SETDB1Q15047 1291 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 ZNF385CQ66K41 422 aaPredicted RBP7.7□□□□□ -1.18
LIMA1-205ENST00000550592 LLGL2Q6P1M3 1020 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 MAP4K3Q8IVH8 894 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 KLHL23Q8NBE8 558 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 GOLM1Q8NBJ4 401 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 GRIN3AQ8TCU5 1115 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 SLC7A3Q8WY07 619 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 NRSN2Q9GZP1 204 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 CACNA2D2Q9NY47 1150 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 PRKAG2Q9UGJ0 569 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 PCDHB5Q9Y5E4 795 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 ROBO2Q9HCK4 1378 aa7.7□□□□□ -1.18
LIMA1-205ENST00000550592 CYP11A1P05108 521 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 GSTP1P09211 210 aaKnown RBP7.69□□□□□ -1.18
LIMA1-205ENST00000550592 ATF4P18848 351 aaPredicted RBP7.69□□□□□ -1.18
LIMA1-205ENST00000550592 SNAP47Q5SQN1 464 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 FAM196AQ6ZSG2 479 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 DMRTC2Q8IXT2 367 aaPredicted RBP7.69□□□□□ -1.18
LIMA1-205ENST00000550592 DTWD1Q8N5C7 304 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 KLHDC7BQ96G42 594 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 TANGO6Q9C0B7 1094 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 MIR1-1HGQ9H1L0 117 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 ENAMQ9NRM1 1142 aa7.69□□□□□ -1.18
LIMA1-205ENST00000550592 LMNB1P20700 586 aa7.68□□□□□ -1.18
LIMA1-205ENST00000550592 SUZ12Q15022 739 aaKnown RBP7.68□□□□□ -1.18
LIMA1-205ENST00000550592 GATAD2BQ8WXI9 593 aa7.68□□□□□ -1.18
LIMA1-205ENST00000550592 SEC16BQ96JE7 1060 aa7.68□□□□□ -1.18
LIMA1-205ENST00000550592 CBX8Q9HC52 389 aa7.68□□□□□ -1.18
LIMA1-205ENST00000550592 FAM221AA4D161 298 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 DEAF1O75398 565 aaPredicted RBP7.67□□□□□ -1.18
LIMA1-205ENST00000550592 TRIM37O94972 964 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 ARHGEF15O94989 841 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 F13A1P00488 732 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 DNAJA1P31689 397 aaKnown RBP7.67□□□□□ -1.18
LIMA1-205ENST00000550592 POU4F3Q15319 338 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 BNC2Q6ZN30 1099 aaPredicted RBP7.67□□□□□ -1.18
LIMA1-205ENST00000550592 GALNT11Q8NCW6 608 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 NEDD1Q8NHV4 660 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 CARD10Q9BWT7 1032 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 LRRC3Q9BY71 257 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 UBP1Q9NZI7 540 aa7.67□□□□□ -1.18
LIMA1-205ENST00000550592 CILPO75339 1184 aa7.66□□□□□ -1.18
LIMA1-205ENST00000550592 MAOBP27338 520 aa7.66□□□□□ -1.18
LIMA1-205ENST00000550592 CRKP46108 304 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms