RNA–Protein interactions for RNA: ENST00000549733.5

NPIPB12-204, Transcript of nuclear pore complex interacting protein family, member B12, humanhuman

TSL 4

Gene NPIPB12, Length 797 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB12-204ENST00000549733 MEIS3Q99687 375 aa8.5□□□□□ -1.05
NPIPB12-204ENST00000549733 LNPKQ9C0E8 428 aa8.5□□□□□ -1.05
NPIPB12-204ENST00000549733 PHAXQ9H814 394 aaKnown RBP8.5□□□□□ -1.05
NPIPB12-204ENST00000549733 MEGF6O75095 1541 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 ESPNB1AK53 854 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 ERVV-2B6SEH9 535 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 TOMM70O94826 608 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 NEXNQ0ZGT2 675 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 AIMP1Q12904 312 aaKnown RBP8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 SLC27A3Q5K4L6 730 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 MEIOBQ8N635 442 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 ZNF526Q8TF50 670 aaPredicted RBP8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 DDX21Q9NR30 783 aaKnown RBP eCLIP8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 PCDHB9Q9Y5E1 797 aa8.49□□□□□ -1.05
NPIPB12-204ENST00000549733 PI4KAP2A4QPH2 592 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 ANXA1P04083 346 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 MYL6BP14649 208 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 DHX9Q08211 1270 aaKnown RBP8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 CEP85Q6P2H3 762 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 KSR2Q6VAB6 950 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 PI4KAP1Q8N8J0 262 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 DCTPP1Q9H773 170 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 PGPEP1Q9NXJ5 209 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 TMOD3Q9NYL9 352 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 C9orf78Q9NZ63 289 aaPredicted RBP8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 CD2APQ9Y5K6 639 aa8.48□□□□□ -1.05
NPIPB12-204ENST00000549733 FAM208AQ9UK61 1670 aaKnown RBP8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 EIF5BO60841 1220 aaKnown RBP8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ALDH1L1O75891 902 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ATP8B2P98198 1209 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ZNF775Q96BV0 537 aaPredicted RBP8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ACSBG1Q96GR2 724 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ZNF496Q96IT1 587 aaPredicted RBP8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 ZFP42Q96MM3 310 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 MAP3K2Q9Y2U5 619 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 COL18A1P39060 1754 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 RGPD5Q99666 1765 aa8.47□□□□□ -1.05
NPIPB12-204ENST00000549733 KDM6AO15550 1401 aaPredicted RBP8.46□□□□□ -1.05
NPIPB12-204ENST00000549733 TNS2Q63HR2 1409 aa8.46□□□□□ -1.05
NPIPB12-204ENST00000549733 IRF5Q13568 498 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 SCARF1Q14162 830 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 C8orf34Q49A92 452 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 SIRT2Q8IXJ6 389 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 PURBQ96QR8 312 aaKnown RBP8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 PRM3Q9NNZ6 103 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 LRRFIP2Q9Y608 721 aaKnown RBP8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 NHSQ6T4R5 1651 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 QSER1Q2KHR3 1735 aa8.46□□□□□ -1.06
NPIPB12-204ENST00000549733 PRAMEF22A3QJZ6 481 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 PTCD1O75127 700 aaKnown RBP8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 RAB15P59190 212 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 CBLBQ13191 982 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 OS9Q13438 667 aaPredicted RBP8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 BEND3Q5T5X7 828 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 Q6ZVU0 165 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 LINC00528Q8N1L1 170 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 XAGE3Q8WTP9 111 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 TEX13AQ9BXU3 409 aaPredicted RBP8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 USP16Q9Y5T5 823 aa8.45□□□□□ -1.06
NPIPB12-204ENST00000549733 ERVH48-1M5A8F1 160 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 MCCD1P59942 119 aaPredicted RBP8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 PROSER3Q2NL68 480 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 HSP90AB4PQ58FF6 505 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 CASC1Q6TDU7 716 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 COPS6Q7L5N1 327 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 COL23A1Q86Y22 540 aaPredicted RBP8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 LINS1Q8NG48 757 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 SYTL4Q96C24 671 aaPredicted RBP8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 MYD88Q99836 296 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 USP44Q9H0E7 712 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 GDPD2Q9HCC8 539 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 TMPRSS4Q9NRS4 437 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 ZNF330Q9Y3S2 320 aaPredicted RBP8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 HEG1Q9ULI3 1381 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 PXDNLA1KZ92 1463 aa8.44□□□□□ -1.06
NPIPB12-204ENST00000549733 WNK3Q9BYP7 1800 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 RAB11FIP3O75154 756 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 SURF6O75683 361 aaKnown RBP8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 C6orf118Q5T5N4 469 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 ZNF592Q92610 1267 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 LRRCC1Q9C099 1032 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 NOP58Q9Y2X3 529 aaKnown RBP8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 ERBB4Q15303 1308 aa8.43□□□□□ -1.06
NPIPB12-204ENST00000549733 SRGAP3O43295 1099 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 SMARCA5O60264 1052 aaPredicted RBP8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 LILRA1O75019 489 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 UPP2O95045 317 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 STARD3NLO95772 234 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 MFAP1P55081 439 aaKnown RBP8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 KCNQ4P56696 695 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 HTRA3P83110 453 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 BECN1Q14457 450 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 BMP2KLQ5H9B9 411 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
NPIPB12-204ENST00000549733 TSEN34Q9BSV6 310 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms