RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 KIF3AQ9Y496 699 aa11.78□□□□□ -0.52
RAB5B-206ENST00000549505 ZNF213O14771 459 aa11.78□□□□□ -0.52
RAB5B-206ENST00000549505 SEPT12Q8IYM1 358 aa11.78□□□□□ -0.52
RAB5B-206ENST00000549505 GNL3LQ9NVN8 582 aaKnown RBP11.78□□□□□ -0.52
RAB5B-206ENST00000549505 TNS1Q9HBL0 1735 aaKnown RBP11.78□□□□□ -0.52
RAB5B-206ENST00000549505 A0A0G2JLW4 131 aa11.77□□□□□ -0.52
RAB5B-206ENST00000549505 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.52
RAB5B-206ENST00000549505 ADD1P35611 737 aaKnown RBP11.77□□□□□ -0.52
RAB5B-206ENST00000549505 RBM43Q6ZSC3 357 aaKnown RBP11.77□□□□□ -0.52
RAB5B-206ENST00000549505 FAM196AQ6ZSG2 479 aa11.77□□□□□ -0.52
RAB5B-206ENST00000549505 BRF1Q92994 677 aa11.77□□□□□ -0.52
RAB5B-206ENST00000549505 CNNM2Q9H8M5 875 aa11.77□□□□□ -0.52
RAB5B-206ENST00000549505 PHF14O94880 888 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 RPS8P62241 208 aaKnown RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 TTLL5Q6EMB2 1281 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 NOL8Q76FK4 1167 aaKnown RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 FAM84BQ96KN1 310 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 NLRP3Q96P20 1036 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 SCAND2PQ9GZW5 306 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 EPB41L4AQ9HCS5 686 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 MORC2Q9Y6X9 1032 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 SH2B2O14492 632 aaPredicted RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 ZPR1O75312 459 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 WASHC4Q2M389 1173 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 AMIGO3Q86WK7 504 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 BRIP1Q9BX63 1249 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
RAB5B-206ENST00000549505 STK36Q9NRP7 1315 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 CCDC88AQ3V6T2 1871 aa11.77□□□□□ -0.53
RAB5B-206ENST00000549505 TAF1P21675 1872 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 GNPATO15228 680 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
RAB5B-206ENST00000549505 CDC37L1Q7L3B6 337 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 IFNL3Q8IZI9 196 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 IGDCC4Q8TDY8 1250 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 RIOK1Q9BRS2 568 aaKnown RBP11.76□□□□□ -0.53
RAB5B-206ENST00000549505 FUCA2Q9BTY2 467 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 DHX16O60231 1041 aaKnown RBP11.76□□□□□ -0.53
RAB5B-206ENST00000549505 BCAMP50895 628 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 TBC1D10CQ8IV04 446 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 PDLIM2Q96JY6 352 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
RAB5B-206ENST00000549505 PRC1O43663 620 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 TRAPPC3LQ5T215 181 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 CCDC183Q5T5S1 534 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 LRRC4BQ9NT99 713 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 CNPY2Q9Y2B0 182 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 TCHHQ07283 1943 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 FDPSP14324 419 aaKnown RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 KRT85P78386 507 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 CAVIN1Q6NZI2 390 aaKnown RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 ARXQ96QS3 562 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 ANKRD31Q8N7Z5 1873 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 GRAPQ13588 217 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 UVSSAQ2YD98 709 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 HS1BP3Q53T59 392 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 GRAPLQ8TC17 118 aaPredicted RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 LARP6Q9BRS8 491 aaKnown RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 KRT23Q9C075 422 aa11.75□□□□□ -0.53
RAB5B-206ENST00000549505 ANGEL1Q9UNK9 670 aaKnown RBP11.75□□□□□ -0.53
RAB5B-206ENST00000549505 GADD45BO75293 160 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-206ENST00000549505 APOBRQ0VD83 1088 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 TMC4Q7Z404 712 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 HELBQ8NG08 1087 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-206ENST00000549505 SRP68Q9UHB9 627 aaKnown RBP11.74□□□□□ -0.53
RAB5B-206ENST00000549505 RCOR1Q9UKL0 485 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 FOCADQ5VW36 1801 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 PTPDC1A2A3K4 754 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 CAVIN4Q5BKX8 364 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 NBPF5PQ86XG9 351 aaPredicted RBP11.74□□□□□ -0.53
RAB5B-206ENST00000549505 MAGEB6Q8N7X4 407 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 FAM184AQ8NB25 1140 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 AIDAQ96BJ3 306 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 ROBO3Q96MS0 1386 aa11.74□□□□□ -0.53
RAB5B-206ENST00000549505 PLSCR1O15162 318 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 JAK2O60674 1132 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 DNM1Q05193 864 aaKnown RBP11.73□□□□□ -0.53
RAB5B-206ENST00000549505 NFIXQ14938 502 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 SBK1Q52WX2 424 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 ZNF384Q8TF68 577 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 TCEANC2Q96MN5 208 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 TACC3Q9Y6A5 838 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 NCLP19338 710 aaKnown RBP11.73□□□□□ -0.53
RAB5B-206ENST00000549505 AKNAD1Q5T1N1 836 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 CYB5R4Q7L1T6 521 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 CERS3Q8IU89 383 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 GZF1Q9H116 711 aaPredicted RBP11.73□□□□□ -0.53
RAB5B-206ENST00000549505 LY9Q9HBG7 655 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
RAB5B-206ENST00000549505 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
RAB5B-206ENST00000549505 GYS1P13807 737 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 CCDC173Q0VFZ6 552 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 TTC6Q86TZ1 520 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 TMTC2Q8N394 836 aa11.73□□□□□ -0.53
RAB5B-206ENST00000549505 MBD4O95243 580 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 NTRK3Q16288 839 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 C10orf71Q711Q0 1435 aa11.72□□□□□ -0.53
RAB5B-206ENST00000549505 CHAMP1Q96JM3 812 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms