RNA–Protein interactions for RNA: ENST00000549499.1

FGD6-205, Transcript of FYVE, RhoGEF and PH domain containing 6, humanhuman

TSL 1 (best) BASIC

Gene FGD6, Length 3,757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD6-205ENST00000549499 FTSJ3Q8IY81 847 aaKnown RBP8.82□□□□□ -1
FGD6-205ENST00000549499 PAGR1Q9BTK6 254 aa8.82□□□□□ -1
FGD6-205ENST00000549499 CEP126Q9P2H0 1117 aa8.82□□□□□ -1
FGD6-205ENST00000549499 PDZRN3Q9UPQ7 1066 aa8.82□□□□□ -1
FGD6-205ENST00000549499 H7C1W4 665 aa8.81□□□□□ -1
FGD6-205ENST00000549499 GPR25O00155 361 aa8.81□□□□□ -1
FGD6-205ENST00000549499 GDF11O95390 407 aa8.81□□□□□ -1
FGD6-205ENST00000549499 EVX2Q03828 476 aa8.81□□□□□ -1
FGD6-205ENST00000549499 ARMC9Q7Z3E5 817 aa8.81□□□□□ -1
FGD6-205ENST00000549499 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
FGD6-205ENST00000549499 FAM43AQ8N2R8 423 aa8.81□□□□□ -1
FGD6-205ENST00000549499 USP44Q9H0E7 712 aa8.81□□□□□ -1
FGD6-205ENST00000549499 USP40Q9NVE5 1235 aa8.81□□□□□ -1
FGD6-205ENST00000549499 ZHX2Q9Y6X8 837 aa8.81□□□□□ -1
FGD6-205ENST00000549499 SDK1Q7Z5N4 2213 aa8.81□□□□□ -1
FGD6-205ENST00000549499 TFCP2Q12800 502 aa8.81□□□□□ -1
FGD6-205ENST00000549499 CLEC10AQ8IUN9 316 aa8.81□□□□□ -1
FGD6-205ENST00000549499 SMCR8Q8TEV9 937 aaPredicted RBP8.81□□□□□ -1
FGD6-205ENST00000549499 LRP2BPQ9P2M1 347 aa8.81□□□□□ -1
FGD6-205ENST00000549499 USP54Q70EL1 1684 aa8.81□□□□□ -1
FGD6-205ENST00000549499 LTBP3Q9NS15 1303 aa8.81□□□□□ -1
FGD6-205ENST00000549499 SMIM22K7EJ46 135 aa8.81□□□□□ -1
FGD6-205ENST00000549499 SURF6O75683 361 aaKnown RBP8.81□□□□□ -1
FGD6-205ENST00000549499 RASAL3Q86YV0 1011 aa8.81□□□□□ -1
FGD6-205ENST00000549499 GJA5P36382 358 aa8.8□□□□□ -1
FGD6-205ENST00000549499 VGLL4Q14135 290 aa8.8□□□□□ -1
FGD6-205ENST00000549499 CCAR1Q8IX12 1150 aaKnown RBP8.8□□□□□ -1
FGD6-205ENST00000549499 PPP1R13LQ8WUF5 828 aa8.8□□□□□ -1
FGD6-205ENST00000549499 DNAJC2Q99543 621 aaKnown RBP8.8□□□□□ -1
FGD6-205ENST00000549499 PTPN18Q99952 460 aa8.8□□□□□ -1
FGD6-205ENST00000549499 COG6Q9Y2V7 657 aa8.8□□□□□ -1
FGD6-205ENST00000549499 CSADQ9Y600 493 aa8.8□□□□□ -1
FGD6-205ENST00000549499 NUP98P52948 1817 aa8.8□□□□□ -1
FGD6-205ENST00000549499 MAPKAPK5Q8IW41 473 aa8.8□□□□□ -1
FGD6-205ENST00000549499 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -1
FGD6-205ENST00000549499 TMOD2Q9NZR1 351 aa8.8□□□□□ -1
FGD6-205ENST00000549499 ZNF70Q9UC06 446 aaPredicted RBP8.8□□□□□ -1
FGD6-205ENST00000549499 HPS5Q9UPZ3 1129 aa8.8□□□□□ -1
FGD6-205ENST00000549499 DLG5Q8TDM6 1919 aa8.8□□□□□ -1
FGD6-205ENST00000549499 PNMA6EA0A0J9YXQ4 647 aa8.79□□□□□ -1
FGD6-205ENST00000549499 DPF2Q92785 391 aa8.79□□□□□ -1
FGD6-205ENST00000549499 EFCC1Q9HA90 598 aa8.79□□□□□ -1
FGD6-205ENST00000549499 ATP2B3Q16720 1220 aa8.79□□□□□ -1
FGD6-205ENST00000549499 SLC9C1Q4G0N8 1177 aa8.79□□□□□ -1
FGD6-205ENST00000549499 COA1Q9GZY4 146 aa8.79□□□□□ -1
FGD6-205ENST00000549499 CWC22Q9HCG8 908 aaKnown RBP8.79□□□□□ -1
FGD6-205ENST00000549499 PALD1Q9ULE6 856 aa8.79□□□□□ -1
FGD6-205ENST00000549499 SCN9AQ15858 1988 aa8.79□□□□□ -1
FGD6-205ENST00000549499 CSPG5O95196 566 aa8.78□□□□□ -1
FGD6-205ENST00000549499 ATN1P54259 1190 aaPredicted RBP8.78□□□□□ -1
FGD6-205ENST00000549499 STRIP1Q5VSL9 837 aa8.78□□□□□ -1
FGD6-205ENST00000549499 CCDC102AQ96A19 550 aa8.78□□□□□ -1
FGD6-205ENST00000549499 COL5A3P25940 1745 aaPredicted RBP8.78□□□□□ -1
FGD6-205ENST00000549499 FAM155AB1AL88 458 aaPredicted RBP8.78□□□□□ -1
FGD6-205ENST00000549499 MPHOSPH10O00566 681 aaKnown RBP8.78□□□□□ -1
FGD6-205ENST00000549499 SMARCA5O60264 1052 aaPredicted RBP8.78□□□□□ -1
FGD6-205ENST00000549499 IFIT1P09914 478 aaKnown RBP8.78□□□□□ -1
FGD6-205ENST00000549499 SPICE1Q8N0Z3 855 aa8.78□□□□□ -1
FGD6-205ENST00000549499 ANKRD13CQ8N6S4 541 aa8.78□□□□□ -1
FGD6-205ENST00000549499 SPDYE2BA6NHP3 402 aa8.78□□□□□ -1
FGD6-205ENST00000549499 SPDYE6P0CI01 402 aa8.78□□□□□ -1
FGD6-205ENST00000549499 CNGA1P29973 690 aa8.78□□□□□ -1
FGD6-205ENST00000549499 ZMYND8Q9ULU4 1186 aaPredicted RBP8.78□□□□□ -1
FGD6-205ENST00000549499 DDX49Q9Y6V7 483 aaKnown RBP8.78□□□□□ -1
FGD6-205ENST00000549499 RAB3GAP1Q15042 981 aa8.77□□□□□ -1
FGD6-205ENST00000549499 RNF208Q9H0X6 261 aa8.77□□□□□ -1
FGD6-205ENST00000549499 TLR7Q9NYK1 1049 aaKnown RBP8.77□□□□□ -1
FGD6-205ENST00000549499 PTCH2Q9Y6C5 1203 aa8.77□□□□□ -1
FGD6-205ENST00000549499 SPP2Q13103 211 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 PLS1Q14651 629 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 TEKT1Q969V4 418 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 RGPD3A6NKT7 1758 aaPredicted RBP8.77□□□□□ -1.01
FGD6-205ENST00000549499 RGPD4Q7Z3J3 1758 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 CHD7Q9P2D1 2997 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 USP2O75604 605 aaPredicted RBP8.77□□□□□ -1.01
FGD6-205ENST00000549499 MAP2K2P36507 400 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 TMEM57Q8N5G2 664 aa8.77□□□□□ -1.01
FGD6-205ENST00000549499 RIF1Q5UIP0 2472 aaKnown RBP8.77□□□□□ -1.01
FGD6-205ENST00000549499 LDHBP07195 334 aaKnown RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 RGS3P49796 1198 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 TGFBRAP1Q8WUH2 860 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 PPM1EQ8WY54 764 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 RTFDC1Q9BY42 306 aaPredicted RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 ANKRD2Q9GZV1 360 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 BRWD1Q9NSI6 2320 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 ERBB4Q15303 1308 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 PDE8BO95263 885 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 RLBP1P12271 317 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 CYP2B6P20813 491 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 DYNLL1P63167 89 aaKnown RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 SPRYD7Q5W111 196 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 B4GALNT3Q6L9W6 998 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 ANTXR1Q9H6X2 564 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 A0A1B0GUL7 405 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 IBSPP21815 317 aaPredicted RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 PSMC4P43686 418 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 MRPL50Q8N5N7 158 aaKnown RBP8.76□□□□□ -1.01
FGD6-205ENST00000549499 AGBL3Q8NEM8 1001 aa8.76□□□□□ -1.01
FGD6-205ENST00000549499 BRI3BPQ8WY22 251 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms