RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TSPYL6Q8N831 410 aa13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 ZNF70Q9UC06 446 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 CSADQ9Y600 493 aa13.83□□□□□ -0.2
TRAFD1-206ENST00000549358 ANKRD18BA2A2Z9 1011 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 APAF1O14727 1248 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 TLR2O60603 784 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 MTFR1Q15390 333 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 SPDYE2Q495Y8 402 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 TEPSINQ96N21 525 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 PLA2G12BQ9BX93 195 aa13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 MYBBP1AQ9BQG0 1328 aaKnown RBP13.82□□□□□ -0.2
TRAFD1-206ENST00000549358 GNRH1P01148 92 aa13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 G2E3Q7L622 706 aa13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 SHISA4Q96DD7 197 aa13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 TTF2Q9UNY4 1162 aaKnown RBP13.81□□□□□ -0.2
TRAFD1-206ENST00000549358 PLIN1O60240 522 aa13.8□□□□□ -0.2
TRAFD1-206ENST00000549358 CETPP11597 493 aa13.8□□□□□ -0.2
TRAFD1-206ENST00000549358 CASP7P55210 303 aa13.8□□□□□ -0.2
TRAFD1-206ENST00000549358 SERPINA10Q9UK55 444 aa13.8□□□□□ -0.2
TRAFD1-206ENST00000549358 ECM29Q5VYK3 1845 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 SPDYE5A6NIY4 337 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 BTBD19C9JJ37 291 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 TNNI2P48788 182 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 PRMT2P55345 433 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 IFIT5Q13325 482 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 MFSD14BQ5SR56 506 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 DZIP1LQ8IYY4 767 aaKnown RBP13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 NKX2-3Q8TAU0 364 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 MYH16Q9H6N6 1097 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 MYH3P11055 1940 aa13.79□□□□□ -0.2
TRAFD1-206ENST00000549358 KIAA0100Q14667 2235 aaKnown RBP13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 PSMC4P43686 418 aa13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 ZKSCAN4Q969J2 545 aaPredicted RBP13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 HTATIP2Q9BUP3 242 aa13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 CPA4Q9UI42 421 aa13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 CHMP3Q9Y3E7 222 aa13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 OTOFQ9HC10 1997 aa13.78□□□□□ -0.2
TRAFD1-206ENST00000549358 IRF6O14896 467 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 CTGFP29279 349 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 GRK4P32298 578 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 CRKP46108 304 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 GJA8P48165 433 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 RANBP2P49792 3224 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 FOXO4P98177 505 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 SNAPC2Q13487 334 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 ERO1BQ86YB8 467 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 RAET1EQ8TD07 263 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 TSR2Q969E8 191 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 ZNF594Q96JF6 807 aaPredicted RBP13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 TRIM47Q96LD4 638 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 PRO3102Q9H379 93 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 ZCCHC17Q9NP64 241 aaKnown RBP13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 SRRDQ9UH36 339 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 RIPOR2Q9Y4F9 1068 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 NR2E3Q9Y5X4 410 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 SNCAIPQ9Y6H5 919 aa13.77□□□□□ -0.21
TRAFD1-206ENST00000549358 ZSWIM8A7E2V4 1837 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 FMNL1O95466 1100 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 GJB1P08034 283 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 CCL5P13501 91 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 HOXD10P28358 340 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 GYG1P46976 350 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 CACNB3P54284 484 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 C17orf99Q6UX52 265 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 UBE2Q1Q7Z7E8 422 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 LINS1Q8NG48 757 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 TDRD7Q8NHU6 1098 aaKnown RBP13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 WRNIP1Q96S55 665 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 RNF208Q9H0X6 261 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 BIN2Q9UBW5 565 aaPredicted RBP13.76□□□□□ -0.21
TRAFD1-206ENST00000549358 OSBPP22059 807 aa13.75□□□□□ -0.21
TRAFD1-206ENST00000549358 HIBADHP31937 336 aaKnown RBP13.75□□□□□ -0.21
TRAFD1-206ENST00000549358 FKBP5Q13451 457 aaPredicted RBP13.75□□□□□ -0.21
TRAFD1-206ENST00000549358 TAF7LQ5H9L4 462 aa13.75□□□□□ -0.21
TRAFD1-206ENST00000549358 DNAAF4Q8WXU2 420 aa13.75□□□□□ -0.21
TRAFD1-206ENST00000549358 ZBTB7BO15156 539 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 FLIIQ13045 1269 aa13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 PPIL2Q13356 520 aa13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 GRIK5Q16478 980 aa13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 CCDC57Q2TAC2 916 aa13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 TWISTNBQ3B726 338 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 LMBR1LQ6UX01 489 aa13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.74□□□□□ -0.21
TRAFD1-206ENST00000549358 COL6A3P12111 3177 aa13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 MYPNQ86TC9 1320 aa13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 PDHXO00330 501 aa13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 SOX1O00570 391 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 DDX10Q13206 875 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 U2AF1L4Q8WU68 220 aaKnown RBP13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 LRCH3Q96II8 777 aa13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 FAM84BQ96KN1 310 aaPredicted RBP13.73□□□□□ -0.21
TRAFD1-206ENST00000549358 EVI5O60447 810 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms