RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 LDHAL6AQ6ZMR3 332 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 XAGE2Q96GT9 111 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 TOMM22Q9NS69 142 aa13□□□□□ -0.33
LINC00661-204ENST00000549354 COL24A1Q17RW2 1714 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 ME1P48163 572 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 TAF7LQ5H9L4 462 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 TMEM87AQ8NBN3 555 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 ZSWIM6Q9HCJ5 1215 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 FAM200AQ8TCP9 573 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 HELLSQ9NRZ9 838 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 UTRNP46939 3433 aa12.99□□□□□ -0.33
LINC00661-204ENST00000549354 MROH5Q6ZUA9 1318 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 BECN2A8MW95 431 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 GOLGA6L6A8MZA4 724 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 ZNF165P49910 485 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 ALDH8A1Q9H2A2 487 aaPredicted RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 FGFR2P21802 821 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 MCMDC2Q4G0Z9 681 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 CCDC158Q5M9N0 1113 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 MTERF4Q7Z6M4 381 aaKnown RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 CREBRFQ8IUR6 639 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 NIP7Q9Y221 180 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 PDE8BO95263 885 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 ADORA1P30542 326 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 SF3A1Q15459 793 aaKnown RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 TPD52L1Q16890 204 aaPredicted RBP12.98□□□□□ -0.33
LINC00661-204ENST00000549354 SLC10A5Q5PT55 438 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 ZMYM1Q5SVZ6 1142 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 HMG20BQ9P0W2 317 aa12.98□□□□□ -0.33
LINC00661-204ENST00000549354 A0A0U1RQG5 324 aaPredicted RBP12.97□□□□□ -0.33
LINC00661-204ENST00000549354 SNAP23O00161 211 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 KLHL34Q8N239 644 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 AKAP11Q9UKA4 1901 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 TNNT1P13805 278 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 SDF4Q9BRK5 362 aa12.97□□□□□ -0.33
LINC00661-204ENST00000549354 ZSCAN31Q96LW9 406 aaPredicted RBP12.96□□□□□ -0.33
LINC00661-204ENST00000549354 SH2B1Q9NRF2 756 aaPredicted RBP12.96□□□□□ -0.33
LINC00661-204ENST00000549354 CLIP2Q9UDT6 1046 aa12.96□□□□□ -0.33
LINC00661-204ENST00000549354 ZSCAN20P17040 1043 aaPredicted RBP12.96□□□□□ -0.33
LINC00661-204ENST00000549354 CCDC152Q4G0S7 254 aa12.96□□□□□ -0.33
LINC00661-204ENST00000549354 LEO1Q8WVC0 666 aaPredicted RBP12.96□□□□□ -0.33
LINC00661-204ENST00000549354 A0A1B0GVL5 298 aa12.96□□□□□ -0.34
LINC00661-204ENST00000549354 GOLGA6L19H0YKK7 550 aa12.96□□□□□ -0.34
LINC00661-204ENST00000549354 SF3B3Q15393 1217 aaKnown RBP12.96□□□□□ -0.34
LINC00661-204ENST00000549354 CCDC144BQ3MJ40 725 aa12.96□□□□□ -0.34
LINC00661-204ENST00000549354 RNF20Q5VTR2 975 aa12.96□□□□□ -0.34
LINC00661-204ENST00000549354 HELBQ8NG08 1087 aaPredicted RBP12.96□□□□□ -0.34
LINC00661-204ENST00000549354 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.34
LINC00661-204ENST00000549354 RNF113AO15541 343 aaKnown RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 ZRSR1Q15695 479 aaKnown RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 CACTINQ8WUQ7 758 aaKnown RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 PGBD1Q96JS3 809 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 NEK1Q96PY6 1258 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 SPTLC3Q9NUV7 552 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 C4BP0C0L5 1744 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 ARID4AP29374 1257 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 MARCKSP29966 332 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 GOLGA8FQ08AF8 430 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 GOLGA8DPQ0D2H9 430 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 SLC4A8Q2Y0W8 1093 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 TTC39AQ5SRH9 613 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 SMAP1Q8IYB5 467 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 INCENPQ9NQS7 918 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 DENND2AQ9ULE3 1009 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 U3KPZ7 1027 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 CASZ1Q86V15 1759 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 USP27XA6NNY8 438 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 ZFYP08048 801 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 TOB2Q14106 344 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 PUM3Q15397 648 aaKnown RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 LPIN2Q92539 896 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 PODXL2Q9NZ53 605 aa12.95□□□□□ -0.34
LINC00661-204ENST00000549354 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 IQSEC3Q9UPP2 1182 aaPredicted RBP12.95□□□□□ -0.34
LINC00661-204ENST00000549354 CYP21A2P08686 494 aa12.94□□□□□ -0.34
LINC00661-204ENST00000549354 LRRFIP1Q32MZ4 808 aaKnown RBP12.94□□□□□ -0.34
LINC00661-204ENST00000549354 SPECC1Q5M775 1068 aa12.94□□□□□ -0.34
LINC00661-204ENST00000549354 PSMA5P28066 241 aa12.94□□□□□ -0.34
LINC00661-204ENST00000549354 SCARF1Q14162 830 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 ZSCAN25Q6NSZ9 544 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 MYL10Q9BUA6 226 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 A0A1B0GUL6 1792 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 RRP12Q5JTH9 1297 aaKnown RBP12.93□□□□□ -0.34
LINC00661-204ENST00000549354 C11orf57Q6ZUT1 292 aaPredicted RBP12.93□□□□□ -0.34
LINC00661-204ENST00000549354 SMC2O95347 1197 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 RPS6KB1P23443 525 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 KCNQ4P56696 695 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 GNL2Q13823 731 aaKnown RBP12.93□□□□□ -0.34
LINC00661-204ENST00000549354 KRT32Q14532 448 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 MYH7P12883 1935 aa12.93□□□□□ -0.34
LINC00661-204ENST00000549354 UQCRFS1P1P0C7P4 283 aa12.92□□□□□ -0.34
LINC00661-204ENST00000549354 PDCP20941 246 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms