RNA–Protein interactions for RNA: ENST00000549336.5

VDR-206, Transcript of vitamin D receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDR, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-206ENST00000549336 TICAM2Q86XR7 235 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 COA1Q9GZY4 146 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 USP40Q9NVE5 1235 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 SIGLEC1Q9BZZ2 1709 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 NBPF26B4DH59 902 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 BMP15O95972 392 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 EPS15P42566 896 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 NBPF10Q6P3W6 841 aaKnown RBP13.52□□□□□ -0.24
VDR-206ENST00000549336 NBPF15Q8N660 670 aa13.52□□□□□ -0.24
VDR-206ENST00000549336 SGSM2O43147 1006 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 CALML3P27482 149 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 MTX1Q13505 466 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 NFIXQ14938 502 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 DOK7Q18PE1 504 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 RBM28Q9NW13 759 aaKnown RBP13.52□□□□□ -0.25
VDR-206ENST00000549336 ZBTB7AO95365 584 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 UBE3CQ15386 1083 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 DSCC1Q9BVC3 393 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 TAOK3Q9H2K8 898 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 TMOD4Q9NZQ9 345 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 CCDC39Q9UFE4 941 aa13.52□□□□□ -0.25
VDR-206ENST00000549336 PTPN12Q05209 780 aaKnown RBP13.51□□□□□ -0.25
VDR-206ENST00000549336 PPP2R5BQ15173 497 aa13.51□□□□□ -0.25
VDR-206ENST00000549336 HOMER1Q86YM7 354 aa13.51□□□□□ -0.25
VDR-206ENST00000549336 PUS3Q9BZE2 481 aaKnown RBP13.51□□□□□ -0.25
VDR-206ENST00000549336 RBM25P49756 843 aaKnown RBP13.51□□□□□ -0.25
VDR-206ENST00000549336 Q6ZUG5 572 aa13.51□□□□□ -0.25
VDR-206ENST00000549336 CEP57L1Q8IYX8 460 aa13.51□□□□□ -0.25
VDR-206ENST00000549336 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
VDR-206ENST00000549336 RRP36Q96EU6 259 aaKnown RBP13.51□□□□□ -0.25
VDR-206ENST00000549336 SULF1Q8IWU6 871 aa13.51□□□□□ -0.25
VDR-206ENST00000549336 PATL2C9JE40 543 aaKnown RBP13.5□□□□□ -0.25
VDR-206ENST00000549336 PDE6AP16499 860 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 PYM1Q9BRP8 204 aaKnown RBP13.5□□□□□ -0.25
VDR-206ENST00000549336 STAP2Q9UGK3 403 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 SAP30BPQ9UHR5 308 aaKnown RBP13.5□□□□□ -0.25
VDR-206ENST00000549336 SSBP05455 408 aaKnown RBP eCLIP13.5□□□□□ -0.25
VDR-206ENST00000549336 CCDC144CPQ8IYA2 1237 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 DCPSQ96C86 337 aaKnown RBP13.5□□□□□ -0.25
VDR-206ENST00000549336 ZSCAN16Q9H4T2 348 aaPredicted RBP13.5□□□□□ -0.25
VDR-206ENST00000549336 ADGRB2O60241 1585 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 SLC15A2Q16348 729 aa13.5□□□□□ -0.25
VDR-206ENST00000549336 TNS2Q63HR2 1409 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 KDM2BQ8NHM5 1336 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 PCP11498 1178 aaKnown RBP13.49□□□□□ -0.25
VDR-206ENST00000549336 PHKA1P46020 1223 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 C6orf50Q9HD87 102 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 MYO5BQ9ULV0 1848 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 FERMT3Q86UX7 667 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 MAGEC2Q9UBF1 373 aaPredicted RBP13.49□□□□□ -0.25
VDR-206ENST00000549336 POLA2Q14181 598 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 ZHX3Q9H4I2 956 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 MYO3BQ8WXR4 1341 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 SMC2O95347 1197 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 PARP1P09874 1014 aaKnown RBP13.49□□□□□ -0.25
VDR-206ENST00000549336 GNA11P29992 359 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 RAB3GAP1Q15042 981 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 TGFBRAP1Q8WUH2 860 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 GLT8D2Q9H1C3 349 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 TCP11L1Q9NUJ3 509 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 CSADQ9Y600 493 aa13.49□□□□□ -0.25
VDR-206ENST00000549336 GJB2P29033 226 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 CIAPIN1Q6FI81 312 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 DBNLQ9UJU6 430 aaKnown RBP13.48□□□□□ -0.25
VDR-206ENST00000549336 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
VDR-206ENST00000549336 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 PODNQ7Z5L7 613 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 MAPKAPK5Q8IW41 473 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 ATP8A2Q9NTI2 1148 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 PPP1R12BO60237 982 aaPredicted RBP13.48□□□□□ -0.25
VDR-206ENST00000549336 MEGF6O75095 1541 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 CRAMP1Q96RY5 1269 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 ALG1Q9BT22 464 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 PLA2G12BQ9BX93 195 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 USP26Q9BXU7 913 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 TNMDQ9H2S6 317 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 AS3MTQ9HBK9 375 aa13.48□□□□□ -0.25
VDR-206ENST00000549336 USP17L3A6NCW0 530 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 USP17L4A6NCW7 530 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 STX6O43752 255 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 CAMTA2O94983 1202 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 NAPAP54920 295 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 USP17L1Q7RTZ2 530 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 ZNF34Q8IZ26 560 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 OSBPL3Q9H4L5 887 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 ITPK1Q13572 414 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 SMARCC2Q8TAQ2 1214 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 FAM227BQ96M60 508 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 ZNF408Q9H9D4 720 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 IGSF3O75054 1194 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
VDR-206ENST00000549336 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
VDR-206ENST00000549336 ANGEL1Q9UNK9 670 aaKnown RBP13.47□□□□□ -0.25
VDR-206ENST00000549336 RGL2O15211 777 aa13.46□□□□□ -0.25
VDR-206ENST00000549336 TRAK2O60296 914 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms