RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 MECOMQ03112 1051 aa14.43□□□□□ -0.1
PTPRR-209ENST00000549308 GRIPAP1Q4V328 841 aa14.43□□□□□ -0.1
PTPRR-209ENST00000549308 DZIP1Q86YF9 867 aaKnown RBP14.43□□□□□ -0.1
PTPRR-209ENST00000549308 FBXW7Q969H0 707 aa14.43□□□□□ -0.1
PTPRR-209ENST00000549308 RTFDC1Q9BY42 306 aaPredicted RBP14.43□□□□□ -0.1
PTPRR-209ENST00000549308 ARMT1Q9H993 441 aa14.43□□□□□ -0.1
PTPRR-209ENST00000549308 MAGEB6P1A0A0J9YX57 407 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 IGSF3O75054 1194 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 PTGER2P43116 358 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 NEK4P51957 841 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 RTKN2Q8IZC4 609 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 MIGA1Q8NAN2 632 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 TBC1D22AQ8WUA7 517 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 NSUN4Q96CB9 384 aaKnown RBP14.42□□□□□ -0.1
PTPRR-209ENST00000549308 JAKMIP1Q96N16 626 aaKnown RBP14.42□□□□□ -0.1
PTPRR-209ENST00000549308 STRBPQ96SI9 672 aaKnown RBP14.42□□□□□ -0.1
PTPRR-209ENST00000549308 CTNNA3Q9UI47 895 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 CD2APQ9Y5K6 639 aa14.42□□□□□ -0.1
PTPRR-209ENST00000549308 APPP05067 770 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 GTF2IP78347 998 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 TMED8Q6PL24 325 aaPredicted RBP14.41□□□□□ -0.1
PTPRR-209ENST00000549308 ILDR2Q71H61 639 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 LCORLQ8N3X6 602 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 FAM205AQ6ZU69 1335 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 GNAT2P19087 354 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 PSMA5P28066 241 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 GSTO1P78417 241 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 KRT32Q14532 448 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 DALRD3Q5D0E6 543 aaKnown RBP14.41□□□□□ -0.1
PTPRR-209ENST00000549308 SOGA3Q5TF21 947 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 ADGRA1Q86SQ6 560 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 SNED1Q8TER0 1413 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 UPF3BQ9BZI7 483 aaKnown RBP14.41□□□□□ -0.1
PTPRR-209ENST00000549308 DBNDD1Q9H9R9 158 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 SLC4A4Q9Y6R1 1079 aa14.41□□□□□ -0.1
PTPRR-209ENST00000549308 PATL2C9JE40 543 aaKnown RBP14.4□□□□□ -0.1
PTPRR-209ENST00000549308 FOXP2O15409 715 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 CD2BP2O95400 341 aaKnown RBP14.4□□□□□ -0.1
PTPRR-209ENST00000549308 CASTP20810 708 aaKnown RBP14.4□□□□□ -0.1
PTPRR-209ENST00000549308 AOC3Q16853 763 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 IMMTQ16891 758 aaKnown RBP14.4□□□□□ -0.1
PTPRR-209ENST00000549308 ADCK5Q3MIX3 580 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 MFSD14BQ5SR56 506 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 ZNF384Q8TF68 577 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 TM6SF1Q9BZW5 370 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
PTPRR-209ENST00000549308 K7ELQ4 463 aaPredicted RBP14.39□□□□□ -0.11
PTPRR-209ENST00000549308 PPIP5K2O43314 1243 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 ECE2O60344 883 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 FGAP02671 866 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 LDHCP07864 332 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 CYP21A2P08686 494 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 DYNLL1P63167 89 aaKnown RBP14.39□□□□□ -0.11
PTPRR-209ENST00000549308 KIAA2012Q0VF49 1180 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 GRIK5Q16478 980 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 TSGA10IPQ3SY00 556 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 TTLL5Q6EMB2 1281 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 PODNQ7Z5L7 613 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 IL27Q8NEV9 243 aa14.39□□□□□ -0.11
PTPRR-209ENST00000549308 CHD4Q14839 1912 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 PSMD1Q99460 953 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 NOL10Q9BSC4 688 aaKnown RBP14.38□□□□□ -0.11
PTPRR-209ENST00000549308 NACAP1Q9BZK3 213 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 ZSWIM6Q9HCJ5 1215 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 CYP46A1Q9Y6A2 500 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 TAF6LQ9Y6J9 622 aa14.38□□□□□ -0.11
PTPRR-209ENST00000549308 RPAP1Q9BWH6 1393 aaPredicted RBP14.38□□□□□ -0.11
PTPRR-209ENST00000549308 PRKAB2O43741 272 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 CPA1P15085 419 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 TDO2P48775 406 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 ALX1Q15699 326 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 BLOC1S2Q6QNY1 142 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 SLF2Q8IX21 1173 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 IFNL3Q8IZI9 196 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 RIOK1Q9BRS2 568 aaKnown RBP14.37□□□□□ -0.11
PTPRR-209ENST00000549308 NAPBQ9H115 298 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 AATFQ9NY61 560 aaKnown RBP eCLIP14.37□□□□□ -0.11
PTPRR-209ENST00000549308 BRCA1P38398 1863 aaKnown RBP14.37□□□□□ -0.11
PTPRR-209ENST00000549308 GSG1L2A8MUP6 293 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 ZNF213O14771 459 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 MCM2P49736 904 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 HAND2P61296 217 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 DIXDC1Q155Q3 683 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 RUFY3Q7L099 469 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 NEK1Q96PY6 1258 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 CRNKL1Q9BZJ0 848 aaKnown RBP14.37□□□□□ -0.11
PTPRR-209ENST00000549308 PDRG1Q9NUG6 133 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 SUGT1Q9Y2Z0 365 aa14.37□□□□□ -0.11
PTPRR-209ENST00000549308 MROH7-TTC4A0A0A0MT08 1334 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 ZMYM6O95789 1325 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 E7EWF7 191 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 BAG3O95817 575 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 NOL8Q76FK4 1167 aaKnown RBP14.36□□□□□ -0.11
PTPRR-209ENST00000549308 SPRYD3Q8NCJ5 442 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 EPB41L4AQ9HCS5 686 aaPredicted RBP14.36□□□□□ -0.11
PTPRR-209ENST00000549308 BCS1LQ9Y276 419 aa14.36□□□□□ -0.11
PTPRR-209ENST00000549308 MYH2Q9UKX2 1941 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 LAMA4Q16363 1823 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 F8W031 263 aaPredicted RBP14.35□□□□□ -0.11
PTPRR-209ENST00000549308 RPS6KB1P23443 525 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms