RNA–Protein interactions for RNA: ENST00000549107.5

PTPRR-208, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-208ENST00000549107 TDRD7Q8NHU6 1098 aaKnown RBP13.38□□□□□ -0.27
PTPRR-208ENST00000549107 NEK1Q96PY6 1258 aa13.38□□□□□ -0.27
PTPRR-208ENST00000549107 PDGFDQ9GZP0 370 aaPredicted RBP13.38□□□□□ -0.27
PTPRR-208ENST00000549107 ARMT1Q9H993 441 aa13.38□□□□□ -0.27
PTPRR-208ENST00000549107 LIMCH1Q9UPQ0 1083 aa13.38□□□□□ -0.27
PTPRR-208ENST00000549107 FGAP02671 866 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 IMMTQ16891 758 aaKnown RBP13.37□□□□□ -0.27
PTPRR-208ENST00000549107 STYK1Q6J9G0 422 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
PTPRR-208ENST00000549107 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 ZMYM6O95789 1325 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 SALL1Q9NSC2 1324 aa13.37□□□□□ -0.27
PTPRR-208ENST00000549107 KIAA1551Q9HCM1 1747 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 E7EWF7 191 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 H0YIN7 160 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 C6orf229H3BNL8 230 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 GNAT2P19087 354 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 ALX1Q15699 326 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 NAA16Q6N069 864 aaPredicted RBP13.36□□□□□ -0.27
PTPRR-208ENST00000549107 ADGRA1Q86SQ6 560 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 LCORLQ8N3X6 602 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 ZGPATQ8N5A5 531 aaKnown RBP13.36□□□□□ -0.27
PTPRR-208ENST00000549107 MIGA1Q8NAN2 632 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 WDR66Q8TBY9 1149 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 ZNF622Q969S3 477 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPRR-208ENST00000549107 INTS4Q96HW7 963 aaKnown RBP13.36□□□□□ -0.27
PTPRR-208ENST00000549107 CWC22Q9HCG8 908 aaKnown RBP13.36□□□□□ -0.27
PTPRR-208ENST00000549107 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
PTPRR-208ENST00000549107 MAGEB6P1A0A0J9YX57 407 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 PATL2C9JE40 543 aaKnown RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 APPP05067 770 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 HMGB1P09429 215 aaKnown RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 IL1R1P14778 569 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 HAND2P61296 217 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 MECOMQ03112 1051 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 ANKRD1Q15327 319 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 SPTY2D1Q68D10 685 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 TMED8Q6PL24 325 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 MPNDQ8N594 471 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 ZNF384Q8TF68 577 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 SLC16A10Q8TF71 515 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 NSUN4Q96CB9 384 aaKnown RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 ZSCAN31Q96LW9 406 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 TCEANC2Q96MN5 208 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 LARP6Q9BRS8 491 aaKnown RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 EPB41L4AQ9HCS5 686 aaPredicted RBP13.35□□□□□ -0.27
PTPRR-208ENST00000549107 CD209Q9NNX6 404 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 JAG2Q9Y219 1238 aa13.35□□□□□ -0.27
PTPRR-208ENST00000549107 TIAM2Q8IVF5 1701 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 GSG1L2A8MUP6 293 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 ZNF213O14771 459 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 PRKAB2O43741 272 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 IGSF3O75054 1194 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 LARGE1O95461 756 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 PRDX5P30044 214 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 CHRNA5P30532 468 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 TOB2Q14106 344 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-208ENST00000549107 NBR1Q14596 966 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 NFKBIBQ15653 356 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 OLFM4Q6UX06 510 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 DHX32Q7L7V1 743 aaKnown RBP13.34□□□□□ -0.27
PTPRR-208ENST00000549107 IFNL3Q8IZI9 196 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 RIOK1Q9BRS2 568 aaKnown RBP13.34□□□□□ -0.27
PTPRR-208ENST00000549107 TMX4Q9H1E5 349 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-208ENST00000549107 SH2B1Q9NRF2 756 aaPredicted RBP13.34□□□□□ -0.27
PTPRR-208ENST00000549107 SLC4A4Q9Y6R1 1079 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 DLEC1Q9Y238 1755 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 SLX4Q8IY92 1834 aa13.34□□□□□ -0.27
PTPRR-208ENST00000549107 RAB3GAP1Q15042 981 aa13.33□□□□□ -0.28
PTPRR-208ENST00000549107 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
PTPRR-208ENST00000549107 DZIP1Q86YF9 867 aaKnown RBP13.33□□□□□ -0.28
PTPRR-208ENST00000549107 CNKSR1Q969H4 720 aa13.33□□□□□ -0.28
PTPRR-208ENST00000549107 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
PTPRR-208ENST00000549107 NAPBQ9H115 298 aa13.33□□□□□ -0.28
PTPRR-208ENST00000549107 TPCN1Q9ULQ1 816 aa13.33□□□□□ -0.28
PTPRR-208ENST00000549107 LDHBP07195 334 aaKnown RBP13.32□□□□□ -0.28
PTPRR-208ENST00000549107 DYNLL1P63167 89 aaKnown RBP13.32□□□□□ -0.28
PTPRR-208ENST00000549107 EXOSC10Q01780 885 aaKnown RBP13.32□□□□□ -0.28
PTPRR-208ENST00000549107 ME3Q16798 604 aa13.32□□□□□ -0.28
PTPRR-208ENST00000549107 Q6ZUG5 572 aa13.32□□□□□ -0.28
PTPRR-208ENST00000549107 TBC1D10CQ8IV04 446 aa13.32□□□□□ -0.28
PTPRR-208ENST00000549107 NACAP1Q9BZK3 213 aa13.32□□□□□ -0.28
PTPRR-208ENST00000549107 COA1Q9GZY4 146 aa13.32□□□□□ -0.28
PTPRR-208ENST00000549107 CHD4Q14839 1912 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 RIMBP2O15034 1052 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 TDO2P48775 406 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 NUCB2P80303 420 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 ST3GAL1Q11201 340 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 CCDC83Q8IWF9 413 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 MB21D2Q8IYB1 491 aaPredicted RBP13.31□□□□□ -0.28
PTPRR-208ENST00000549107 NCOA7Q8NI08 942 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 LRRC2Q9BYS8 371 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 KIF13BQ9NQT8 1826 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 FAM205AQ6ZU69 1335 aa13.31□□□□□ -0.28
PTPRR-208ENST00000549107 CAPN15O75808 1086 aa13.3□□□□□ -0.28
PTPRR-208ENST00000549107 GSTO1P78417 241 aa13.3□□□□□ -0.28
PTPRR-208ENST00000549107 GRIK5Q16478 980 aa13.3□□□□□ -0.28
PTPRR-208ENST00000549107 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms