RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 IGHA2P01877 340 aa8.39□□□□□ -1.07
UBE2N-202ENST00000548946 ALKBH8Q96BT7 664 aaKnown RBP8.39□□□□□ -1.07
UBE2N-202ENST00000548946 PCMTD2Q9NV79 361 aa8.39□□□□□ -1.07
UBE2N-202ENST00000548946 TRAK1Q9UPV9 953 aa8.39□□□□□ -1.07
UBE2N-202ENST00000548946 GADD45BO75293 160 aaPredicted RBP8.38□□□□□ -1.07
UBE2N-202ENST00000548946 TIAF1O95411 115 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 DLGAP3O95886 979 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 ITPKAP23677 461 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 MAP4P27816 1152 aaKnown RBP8.38□□□□□ -1.07
UBE2N-202ENST00000548946 RXRBP28702 533 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 PTPN12Q05209 780 aaKnown RBP8.38□□□□□ -1.07
UBE2N-202ENST00000548946 CSRNP1Q96S65 589 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 DCTN4Q9UJW0 460 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 CCDC180Q9P1Z9 1646 aa8.38□□□□□ -1.07
UBE2N-202ENST00000548946 COBLO75128 1261 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 B3GALT4O96024 378 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 MAOBP27338 520 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 SSTR4P31391 388 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 GRIK1P39086 918 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 USP11P51784 963 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 POU4F3Q15319 338 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 ZDHHC13Q8IUH4 622 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 NRSN2Q9GZP1 204 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 ZNF576Q9H609 170 aa8.37□□□□□ -1.07
UBE2N-202ENST00000548946 TGFB1P01137 390 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 DRD2P14416 443 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 CD97P48960 835 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 SOX4Q06945 474 aaPredicted RBP8.36□□□□□ -1.07
UBE2N-202ENST00000548946 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 PRPF40BQ6NWY9 871 aaKnown RBP8.36□□□□□ -1.07
UBE2N-202ENST00000548946 GIMAP7Q8NHV1 300 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 CORO1BQ9BR76 489 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 YIPF2Q9BWQ6 316 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 KRTAP4-8Q9BYQ9 185 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 NLRP2Q9NX02 1062 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 PPP4R2Q9NY27 417 aa8.36□□□□□ -1.07
UBE2N-202ENST00000548946 TMEM238LA0A1B0GVL6 79 aa8.35□□□□□ -1.07
UBE2N-202ENST00000548946 INTS5Q6P9B9 1019 aaKnown RBP8.35□□□□□ -1.07
UBE2N-202ENST00000548946 TMC7Q7Z402 723 aa8.35□□□□□ -1.07
UBE2N-202ENST00000548946 RAD18Q9NS91 495 aa8.35□□□□□ -1.07
UBE2N-202ENST00000548946 FAM95CA0A1B0GW59 222 aa8.34□□□□□ -1.07
UBE2N-202ENST00000548946 RPS26P11Q5JNZ5 115 aaPredicted RBP8.34□□□□□ -1.07
UBE2N-202ENST00000548946 SHKBP1Q8TBC3 707 aa8.34□□□□□ -1.07
UBE2N-202ENST00000548946 ABCB6Q9NP58 842 aa8.34□□□□□ -1.07
UBE2N-202ENST00000548946 MAPK1P28482 360 aa8.33□□□□□ -1.08
UBE2N-202ENST00000548946 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
UBE2N-202ENST00000548946 AP3B2Q13367 1082 aa8.33□□□□□ -1.08
UBE2N-202ENST00000548946 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
UBE2N-202ENST00000548946 PAOXQ6QHF9 649 aa8.33□□□□□ -1.08
UBE2N-202ENST00000548946 C2CD4AQ8NCU7 369 aaPredicted RBP8.33□□□□□ -1.08
UBE2N-202ENST00000548946 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
UBE2N-202ENST00000548946 WDR64B1ANS9 1081 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 ADH5P11766 374 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 GRM2Q14416 872 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 FBLIM1Q8WUP2 373 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 MFSD14AQ96MC6 490 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
UBE2N-202ENST00000548946 ATG3Q9NT62 314 aa8.32□□□□□ -1.08
UBE2N-202ENST00000548946 PRR19A6NJB7 356 aa8.31□□□□□ -1.08
UBE2N-202ENST00000548946 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
UBE2N-202ENST00000548946 KIAA1324LA8MWY0 1029 aaPredicted RBP8.3□□□□□ -1.08
UBE2N-202ENST00000548946 CTSBP07858 339 aa8.3□□□□□ -1.08
UBE2N-202ENST00000548946 XRCC5P13010 732 aaKnown RBP8.3□□□□□ -1.08
UBE2N-202ENST00000548946 HNRNPUQ00839 825 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBE2N-202ENST00000548946 PDE3AQ14432 1141 aa8.3□□□□□ -1.08
UBE2N-202ENST00000548946 AKAP4Q5JQC9 854 aa8.3□□□□□ -1.08
UBE2N-202ENST00000548946 DTHD1Q6ZMT9 781 aa8.3□□□□□ -1.08
UBE2N-202ENST00000548946 DYMQ7RTS9 669 aa8.3□□□□□ -1.08
UBE2N-202ENST00000548946 MED26O95402 600 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 KCNA1Q09470 495 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 DSC3Q14574 896 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 ZSCAN29Q8IWY8 852 aaPredicted RBP8.29□□□□□ -1.08
UBE2N-202ENST00000548946 FBXL6Q8N531 539 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 GLIS3Q8NEA6 775 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 EZH1Q92800 747 aaPredicted RBP8.29□□□□□ -1.08
UBE2N-202ENST00000548946 OSBPL1AQ9BXW6 950 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 AP4E1Q9UPM8 1137 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 ACTL7BQ9Y614 415 aa8.29□□□□□ -1.08
UBE2N-202ENST00000548946 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-202ENST00000548946 PNMA6FA0A0J9YX94 578 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 LOC105371045A0A1W2PR82 267 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 TREHO43280 583 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 ECEL1O95672 775 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 ZNF157P51786 506 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-202ENST00000548946 FCGRTP55899 365 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 PPP2R3AQ06190 1150 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
UBE2N-202ENST00000548946 MAP7Q14244 749 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 CPSF6Q16630 551 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBE2N-202ENST00000548946 BCO2Q9BYV7 579 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 PIM2Q9P1W9 311 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 LEMD3Q9Y2U8 911 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 IVNS1ABPQ9Y6Y0 642 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 SYNGAP1Q96PV0 1343 aa8.28□□□□□ -1.08
UBE2N-202ENST00000548946 AOC2O75106 756 aa8.27□□□□□ -1.09
UBE2N-202ENST00000548946 F13BP05160 661 aa8.27□□□□□ -1.09
UBE2N-202ENST00000548946 ASPAP45381 313 aa8.27□□□□□ -1.09
UBE2N-202ENST00000548946 FAAP100Q0VG06 881 aa8.27□□□□□ -1.09
UBE2N-202ENST00000548946 ENOX2Q16206 610 aaKnown RBP8.27□□□□□ -1.09
UBE2N-202ENST00000548946 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms